Gene Pfl01_3886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3886 
Symbol 
ID3712532 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4395183 
End bp4396325 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content64% 
IMG OID 
Producterythronate-4-phosphate dehydrogenase 
Protein accessionYP_349614 
Protein GI77460107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.15672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGATTG TTGCCGACGA AAATATCCCG CTGCTCGATG CCTTTTTTGC CGGTTTCGGT 
GAGATTCGCC GAGTACCGGG CCGTTCCATC GACCGGGCCA CGGTCGAACA GGCCGATGTA
TTGCTGGTGC GCTCGGTGAC CAACGTCAAC CGCGCACTGC TTGAAGGCAG CAAGGTGCGT
TTTGTCGGCA CCTGCACCAT CGGCACCGAT CATCTGGATC TCGATTACTT CAATGAGGCC
GGGATCACCT GGTCCAGCGC GCCCGGCTGC AATGCCCGGG GCGTGGTCGA TTACGTGCTC
GGCAGCCTGA TGACCCTGGC TGAAATCGAA GGCGTCGATT TGCGTGAACG CACTTACGGT
GTGATCGGGG CCGGTGAAGT GGGCGGTCGC CTGATCAAGG TGCTCAAAGG CCTGGGCTGG
AACGTGAAAG TCTGCGATCC GCCGCGTCAG GCGGCCGAGG GCGGCGACTA TGTCAGCCTG
GAGCAGATCA TCGCGCAGTG CGACGTGATC AGCCTGCACA CCCCGCTGAC CCGCAGCGGT
GACGGTGCGA CCTGGCATTT GTTCGACGAG CAGCGTTTGC AGCAGCTCAA GCCCGGCGCC
TGGTTGATCA ACGCGGCTCG CGGTCCGGTG GTGGATAACA CCGCGTTGCG CGAAGTGCTG
CTGGAGCGTG AAGACCTGCA AGCAGTGCTC GATGTCTGGG AGGCCGAGCC GCAAGTCGAT
GTTTCTCTGG CCGAGCTCTG CGTGTTGGCG ACGCCGCACA TCGCCGGTTA CAGCCTCGAC
GGCAAGCAGC GCGGCACCGC GCAGATCTAT CAGGCTTACT GCGACTTTAT CGGTGAGCCC
GCCAGCATTC AGCTCGGCGA TCTGCTGCCG GCGCCGTGGT TGTCGGAAGT TTCCCTGCAT
GCCGACAGCG ATCCAGCCTG GGCGCTGGCG ATGTTGTGCC GCGGTGTGTA CGACCCGCGC
CGGGACGACG CGGATTTCCG TCGCACGCTG CTGGGCAGCG TCGGTGAGCA ACGTGCGGCG
TTCGATGTGT TGCGCAAGCA GTATCCGTCG CGACGCGAGA TCGAAGGTTT GAAGGTGCGG
ATCGAGGGCG ATTCGCCGGC CCTGCGCCAG ATCGTGGCCG CGCTGGGCGC TGTGGCGGTA
TAA
 
Protein sequence
MLIVADENIP LLDAFFAGFG EIRRVPGRSI DRATVEQADV LLVRSVTNVN RALLEGSKVR 
FVGTCTIGTD HLDLDYFNEA GITWSSAPGC NARGVVDYVL GSLMTLAEIE GVDLRERTYG
VIGAGEVGGR LIKVLKGLGW NVKVCDPPRQ AAEGGDYVSL EQIIAQCDVI SLHTPLTRSG
DGATWHLFDE QRLQQLKPGA WLINAARGPV VDNTALREVL LEREDLQAVL DVWEAEPQVD
VSLAELCVLA TPHIAGYSLD GKQRGTAQIY QAYCDFIGEP ASIQLGDLLP APWLSEVSLH
ADSDPAWALA MLCRGVYDPR RDDADFRRTL LGSVGEQRAA FDVLRKQYPS RREIEGLKVR
IEGDSPALRQ IVAALGAVAV