| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3883 |
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| Symbol | |
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| ID | 3712529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 4390847 |
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| End bp | 4392799 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_349611 |
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| Protein GI | 77460104 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.320153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTCTC TGCCCGGATG TCTCATGCGC AGTCGCCTCT TCAGTGTTTT GTCATGTTTG
CTGCTTTCCG CCGCTGCCGT TCAATCCGCT CAGGCGGTGG ACCTGTCCAC CCAACGCCAG
TATTACGATG AAGCCAAGCG CGCCCTGGCC AAGGGCGACA GCGGCCCGTA TTTCCGTTAC
AGCCAGGCTC TCGCCGATTA TCCGCTGGAG CCGTACCTCG CCTACGACGA GCTGACTGCG
CGGCTGAAAA CCGCCAGCAA CGCGGAGATC GAGAAATTCC TCGCCGAGCA CGGTGACCTG
CCGCAGGCCA ACTGGATGAA ATTGCGCTGG CTGCGCTGGC TGGCCGATCG CGGCGATTGG
GCGACGTTCG TCAAGTATTA CGACCCGAAA CTGAATTTCA CTGAACTTGA CTGCCTCCAC
GCGCAATACC AGATCAGCCA CAACAAGAAG GCCGAGGGCT ACGCCAACGC CGAGAAGCTC
TGGCTGACCG GCAAATCCCA GCCTGCCGCC TGTGATGCGC TGTTTGGCAT GTGGGCCGCC
GAAGGTCAGT TGACCGAACA GAAACGCTGG GAGCGCGCCA AACTCGCCGC CCAACACCGC
AACTATCCGC TGGCCAACAG CCTGGTCAAC GGCCTGACCA CCCTCGCCCC GCGCGGCCGC
CTGCTGGTGG ACGTGGCGCA GAAACCGGAA CTGCTCAATC AGCCTTCGCG GTTCATGCCG
GCCGATGAAC CGATGTCGGA CGTGGTCAGC CTCGGCCTGC GCCGCCTCGC GCGTCAGGAC
CCGGACAAGG CCATGGCCCT GCTCGACGGT TATGCCAGCA GCATGCATTT CTCCCGCGAT
GAAAAAGTCG CGATCGCCCG GGAAATCGGC CTGACCCTCG CCCGGCGCTT CGACAGCCGC
GCGCTGGACG TGATGACCAA GTACGACCCG GAACTGCGCG ACAACACCGT GTCCGAATGG
CGCCTGCGGC TGCTGCTGCG TCTGGCGCGC TGGGACGACG CCTACCAACT GACCCGCCGT
CTCCCGCAGG ATCTGGCCAC TACCAACCGC TGGCGCTACT GGCAGGCCCG CAGCCTGGAA
CTGGCGCAAC CGCAAAACCC GGAAGCGCAG ACGCTGTACA AGAATCTGTC GCGGGAACGG
GATTTCTACG GCTTCCTCGC CGCCGACCGC TCGCAATCGC CGTACTCGCT GAACAACAAG
CCGCTGGTGC TCAGTCAGGC GCTGATCAAC AAGGTGCGCA ACACCCCGGG CGTGCGTCGT
GCGCTGGAGT TCCACGCCCG TGGGCAGATC GTCGATGGCC GCCGCGAGTG GTATCACGTC
AGCCGGCATT TCAGCCGCGA CGAAATGGTC GCCCAGGCGA AACTGGCCTA CGACCTGAGA
TGGTACTTCC CGGCCATCCG CACCATCAGT CAGGCGCAGT ACTGGGATGA TCTGGACATC
CGTTTCCCGA TGGCCCACCG CGACACTCTG GTGCGCGAAG CCAAGGTGCG CGGCCTGCAT
TCGAGCTGGG TGTTCGCCAT CACCCGTCAG GAAAGTGCAT TCATGGACGA CGCCCGTTCC
AGCGTCGGCG CCAGCGGCCT GATGCAACTG ATGCCCGGCA CCGCCAAGGA AACCGCGCGC
AAGTTCAGCA TTCCGCTGGC CTCGCCACAG CAGGTGCTGG ATCCGGATAA AAACATCCAG
CTCGGCGCCG CTTACCTGAG CCAGGTGCAC AGCCAGTTCA ACGGCAACCG CGTGCTCGCC
TCCGCCGCCT ACAACGCCGG CCCCGGCCGC GTGCGCCAGT GGCTGCGTGG CGCCGACCAT
CTGAGCTTCG ACGTGTGGGT GGAAAGCATC CCGTTCGACG AAACCCGCCA GTACGTGCAG
AACGTGCTGT CCTACTCGGT GATCTACGGC CAGAAACTCA ATTCGCCGCA ACCGCTGGTG
GATTGGCATG AGCGGTATTT CGACGATCAG TGA
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| Protein sequence | MISLPGCLMR SRLFSVLSCL LLSAAAVQSA QAVDLSTQRQ YYDEAKRALA KGDSGPYFRY
SQALADYPLE PYLAYDELTA RLKTASNAEI EKFLAEHGDL PQANWMKLRW LRWLADRGDW
ATFVKYYDPK LNFTELDCLH AQYQISHNKK AEGYANAEKL WLTGKSQPAA CDALFGMWAA
EGQLTEQKRW ERAKLAAQHR NYPLANSLVN GLTTLAPRGR LLVDVAQKPE LLNQPSRFMP
ADEPMSDVVS LGLRRLARQD PDKAMALLDG YASSMHFSRD EKVAIAREIG LTLARRFDSR
ALDVMTKYDP ELRDNTVSEW RLRLLLRLAR WDDAYQLTRR LPQDLATTNR WRYWQARSLE
LAQPQNPEAQ TLYKNLSRER DFYGFLAADR SQSPYSLNNK PLVLSQALIN KVRNTPGVRR
ALEFHARGQI VDGRREWYHV SRHFSRDEMV AQAKLAYDLR WYFPAIRTIS QAQYWDDLDI
RFPMAHRDTL VREAKVRGLH SSWVFAITRQ ESAFMDDARS SVGASGLMQL MPGTAKETAR
KFSIPLASPQ QVLDPDKNIQ LGAAYLSQVH SQFNGNRVLA SAAYNAGPGR VRQWLRGADH
LSFDVWVESI PFDETRQYVQ NVLSYSVIYG QKLNSPQPLV DWHERYFDDQ
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