Gene Pfl01_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3872 
Symbol 
ID3712518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4378489 
End bp4379097 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content59% 
IMG OID 
ProductLexA repressor 
Protein accessionYP_349600 
Protein GI77460093 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.315226 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.945039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTAAAC TGACGCCACG CCAAGCCGAG ATTCTGGCCT TTATCAAACG TTGCCTCGAA 
GACAACGGCT ACCCGCCGAC CCGTGCGGAA ATCGCTCAGG AACTGGGTTT CAAGTCGCCC
AATGCGGCCG AAGAGCACCT CAAGGCACTC GCCCGCAAAG GCGCGATCGA GATGACTCCC
GGCGCCTCGC GCGGCATTCG GATCCCCGGT TTTGAAGCCA AGGTCGACGA ATCCACCCTG
CCGATCATCG GTCGAGTAGC TGCCGGCGCG CCGATTCTCG CCCAACAACA CATCGAAGAG
TCCTGCAACA TCAACCCGGC CTTCTTTCAT CCGCGTGCCG ACTACCTGTT GCGCGTTCAT
GGCATGAGCA TGAAGGACAT CGGCATTTTC GACGGTGATC TGCTGGCGGT TCATACCACT
CGCGAGGCAC GCAACGGTCA GATCGTGGTT GCGCGGATCG GCGACGAAGT CACCGTCAAA
CGCTTCAAGC GTGACGGCAG CAAAGTCTGG CTGATTGCCG AAAACCCCGA GTTCGCCCCC
ATCGAAGTCA ACCTGAAAGA TCAGGAACTG GTGATCGAAG GCTTGAGTGT CGGCGTTATC
CGCCGCTAA
 
Protein sequence
MLKLTPRQAE ILAFIKRCLE DNGYPPTRAE IAQELGFKSP NAAEEHLKAL ARKGAIEMTP 
GASRGIRIPG FEAKVDESTL PIIGRVAAGA PILAQQHIEE SCNINPAFFH PRADYLLRVH
GMSMKDIGIF DGDLLAVHTT REARNGQIVV ARIGDEVTVK RFKRDGSKVW LIAENPEFAP
IEVNLKDQEL VIEGLSVGVI RR