Gene Pfl01_3863 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3863 
Symbol 
ID3712293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4364582 
End bp4365631 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content59% 
IMG OID 
ProductApbE-like lipoprotein 
Protein accessionYP_349591 
Protein GI77460084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCG CGGTTTTGCG GGGAGATGAA GAATTGTTAA CTGGACGGTG GGGGATTCTC 
GTGCTGCTGG GCTGGGTTTT GGCCGGCTGT GGCAACGGCG ATTCCCTTGA GACTTTCGGT
GGCCCGACGA TGGGCAGCAC CTATTCGATC AAGTACGTGC GCCACGCCCA TCTGCCTGCC
CCCCAGACGG TGCGTATCGA AGTGGAAAAA ATCCTCGCGG ACGTCGACCG GCAGATGTCG
ACTTACCGCG CAGACTCCGA TATCTCGCGC TTCAATGCAT TGCCGGCTGA TCGCTGTCAG
GTCATGCCCG CACCGATCCT TGAATTGATC CGCGTGGGCG AACAGCTGTC GCAACAAAGC
GAAGGCTCCT ACGACCTCAC GGTTGAGCCG CTGATGAATC TGTGGGGTTT CGGCCCGCAG
GGGCGTGAAG AAAAAGTCCC GGATGCGGCG GCGCTGGCCA AAGTGCGCCA ACGAGTCGGT
CATCAACACC TGCACATCGA CGGCGACCGG TTATGCAAGG ATGCGGCGGT CGAGGTGGAC
GTCAACAGCA TTGCCGCCGG GTACGCGGTT GACACCATTA CCGCGCGGCT CGAGGCTCTG
GGCATCCATG ACTATCTCGC GGAAGCCACC GGCGAGCTCA AGGCTTCCGG CAAGAAGCTT
GATGGTTCGC CGTGGCGTAT CGCTCTGGAA GAACCGCAAG ACGATCAGCA GGTGGCAGAG
CGCGTCATTA ATGTGGATGG CTACGGCCTG TCCACCTCCG GCGACTATCG CAACTATTTT
CAGCAGGATG GCCGTCGCTA TTCCCACACC TTCGATGCCC GGACCGGTGC GCCGGTCCTA
CACGATCTGG CGTCGGTCAC GGTAATTCAT CCTTCAGCGC TGATGGCCGA TGGACTATCG
ACGCTGTTGC TGATTCTCGG GCCTGAAAGA GCTTGGGACT ATGCCGAAAA ACACGACATT
GGTGCATTCT TTGTGATTCG TGCCGATACA GGTTTCGTCA CACGCACCAG TCACGCTTTT
GAACGGCTCA GTGGCGCAAA AGTTGACTGA
 
Protein sequence
MAGAVLRGDE ELLTGRWGIL VLLGWVLAGC GNGDSLETFG GPTMGSTYSI KYVRHAHLPA 
PQTVRIEVEK ILADVDRQMS TYRADSDISR FNALPADRCQ VMPAPILELI RVGEQLSQQS
EGSYDLTVEP LMNLWGFGPQ GREEKVPDAA ALAKVRQRVG HQHLHIDGDR LCKDAAVEVD
VNSIAAGYAV DTITARLEAL GIHDYLAEAT GELKASGKKL DGSPWRIALE EPQDDQQVAE
RVINVDGYGL STSGDYRNYF QQDGRRYSHT FDARTGAPVL HDLASVTVIH PSALMADGLS
TLLLILGPER AWDYAEKHDI GAFFVIRADT GFVTRTSHAF ERLSGAKVD