Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3858 |
Symbol | |
ID | 3712288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4359593 |
End bp | 4360291 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | lipoprotein releasing system, ATP-binding protein |
Protein accession | YP_349586 |
Protein GI | 77460079 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.802026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTGAGT CGGGCATGAG TGAAAAAGCA ATCTTGAGCT GCCGCAACCT GGGCAAATCC TACGAGGAAG GCCCGGAGTC GGTGGAAGTG CTGGCCAACC TGCAACTGGA ACTGCATCCA GGCGAGCGGG TGGCGATCGT CGGCAAGTCC GGTTCGGGCA AAAGTACCTT GCTCAACCTG TTGGGCGGTC TCGACACGCC GACCAAGGGC GGTGTCTGGC TCGACGGTGA AGAACTGTCG GCGCTGAGCG AGAAAAAGCG TGGCCTGCTG CGTAACCGTG CCCTCGGGTT CGTGTACCAG TTCCACCACT TGCTGCCGGA ATTCACCGCG CTGGAAAACG TCTGCATGCC GCTGCTGATC GGCAAGACCG CGATCCCGGA AGCCCGTCAG CGTGCCACGG CGTTGCTGGA GCGAGTGGGC CTGGGCCATC GCCTGGAACA CAAACCGGCG GAGCTGTCCG GTGGCGAACG CCAGCGTGTG GCCATCGCCC GTGCGCTGGT CAACAATCCA GGACTGGTGA TGCTCGACGA GCCGACCGGC AACCTAGACT CCCACACCGC TGAGGGCATT CAGGATCTGA TGCTGGAACT CAGCACGTCG ATGCGCACGG CGTTTCTGGT GGTGACTCAC GACATGAACC TGGCTCGCCA GATGGACCGC GTCCTGCAGC TGCAGGAAGG TTGCCTGACC CCCATCTGA
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Protein sequence | MSESGMSEKA ILSCRNLGKS YEEGPESVEV LANLQLELHP GERVAIVGKS GSGKSTLLNL LGGLDTPTKG GVWLDGEELS ALSEKKRGLL RNRALGFVYQ FHHLLPEFTA LENVCMPLLI GKTAIPEARQ RATALLERVG LGHRLEHKPA ELSGGERQRV AIARALVNNP GLVMLDEPTG NLDSHTAEGI QDLMLELSTS MRTAFLVVTH DMNLARQMDR VLQLQEGCLT PI
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