| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3855 |
|---|
| Symbol | |
|---|
| ID | 3712285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4356235 |
|---|
| End bp | 4356915 |
|---|
| Gene Length | 681 bp |
|---|
| Protein Length | 226 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | two component heavy metal response transcriptional regulator |
|---|
| Protein accession | YP_349583 |
|---|
| Protein GI | 77460076 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.845216 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGC TGATCGTCGA AGACCAACCC AAAACCGGCC AGTACCTGCG CCAGGGCCTG
ACCGAGGCCG GTTTCAACAC CGAACTGGTG GCCGACGGCA CCACCGGCCA GCAATTGGCG
TTGAGTGGCG ACTATGCGCT GCTGATCCTC GATGTGATGC TGCCCGGACG CAATGGCTGG
CAGATCCTGC AGGCGGTGCG CAGCGCCGGC CTGGAAACAC CGATCCTGTT TTTGACCGCC
AAGGACACCG TGGAAGATAG GGTTCACGGC CTCGAACTGG GCGCCGACGA CTACCTGGTC
AAACCGTTCG CTTTCTCCGA ACTGCTGGCG CGGGTGCGCA GCCTGTTACG CCGCGGCAGT
TCCACGCCCC AGGAAACCAG CCTGCGCCTG GCCGATCTGA GTCTGGATCT GATCCGCCGC
CGGGTCGAAC GCAGCGGTCA ACGCATCGAC CTCACCGCCA AAGAGTTCGC CCTGCTGGAA
ATGCTCCTGC GCCGTCAGGG CGAAGTGCTG CCCAAGTCAC TGATCGCCTC GCAGGTCTGG
GACATGAACT TCGACAGCGA CACCAATGTG ATCGAAGTGG CGATTCGTCG ACTGCGCCTG
AAGATCGATG ACGACTTCCC CAACAAGCTG ATCCACACCG TACGCGGCAT GGGTTACGTC
CTTGAAGAGC GTGCCGACTG A
|
|---|
| Protein sequence | MKLLIVEDQP KTGQYLRQGL TEAGFNTELV ADGTTGQQLA LSGDYALLIL DVMLPGRNGW
QILQAVRSAG LETPILFLTA KDTVEDRVHG LELGADDYLV KPFAFSELLA RVRSLLRRGS
STPQETSLRL ADLSLDLIRR RVERSGQRID LTAKEFALLE MLLRRQGEVL PKSLIASQVW
DMNFDSDTNV IEVAIRRLRL KIDDDFPNKL IHTVRGMGYV LEERAD
|
|---|
| |