Gene Pfl01_3848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3848 
Symbol 
ID3714875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4350736 
End bp4351218 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content57% 
IMG OID 
Productanti-sigma-factor antagonist (STAS) 
Protein accessionYP_349576 
Protein GI77460069 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.958774 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTACCG GTAGAATCCA GTTCGCCGAG CAGGACGGCA CCTTCGTCCT GAAGTTCGTC 
GGTGAAGTTC GCCTGACCCT GTGTTCGGCG TTGGATGCGA CTATTGAAAA AATCTTCACC
GCGCTGAATT TCAACGCGAT CGTGATCGAT TTGACCGAAA CCCGCAGCAT CGACAGCACC
ACCCTGGGCC TGTTGGCCAA GCTGTCGATC CTGTCGCGGC AGAAGGTCGG CCTGCTGCCG
ACCGTGGTCA CCACCCACGA GGACATCACC CGTCTGTTGC AGTCGATGGG TTTCGAGCAG
GTGTTCAATA TCGTCAATCA TCCCGTGCCT TGCCCGGAAT GCCTTGATGA TCTGCCGGAT
CAGGATCAGT CGGAAGAGGT GGTGCGGATC AAGGTGCTCG AAGCGCACAA GATCCTCATG
GGCCTGAACG ACTCCAACCG CGAAGCCTTC CATGACCTGG TGAATGCCCT CGAGCGGCAT
TGA
 
Protein sequence
MSTGRIQFAE QDGTFVLKFV GEVRLTLCSA LDATIEKIFT ALNFNAIVID LTETRSIDST 
TLGLLAKLSI LSRQKVGLLP TVVTTHEDIT RLLQSMGFEQ VFNIVNHPVP CPECLDDLPD
QDQSEEVVRI KVLEAHKILM GLNDSNREAF HDLVNALERH