Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3844 |
Symbol | |
ID | 3714871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4345611 |
End bp | 4347833 |
Gene Length | 2223 bp |
Protein Length | 740 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | lipopolysaccharide biosynthesis |
Protein accession | YP_349572 |
Protein GI | 77460065 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTAC CGTCAGTAAT CGGCACCCGT GAAAATGATC AAGACAGTAT TGATCTTCTC GGCATCTTCG GCAGCCTGAT CGATCAGAAG TGGTTGATCG GTGCGTTCAC CGGCGCATTC ATGATGACCG GTGTGGCCTA TGCGATTTTG GCCACGCCGG TGTATCTGGC CAATGCGTTG GTGCAGGTCG AACCGAAAAA GAACGACATG CTCGGTTTTT CCGACCTCAA CAGCATGCTC GGCGGGCAAT CGCCGTCGGT GACCGAAATC GGCATCATCA AATCCCGCGC GGTGATCGGC AAGACAGTCG ACGACCTGCG CCTGGACATC GACGTCACCC CCAACACCTT TCCGCTGATT GGCGGCTTTC TTTCCCGGCG TTATCGCGGC GAGACCGAAC TCAGCGTCGC GCCGCCGCGC TTCGGCCTGA GCAGCTACGC CTGGGGCGGT GAACGCCTGG AGTTTGCCAA GCTCAATCTG CCCAAGGAGC TGCTGGGCAA GAAACTCACC CTGATCGCCG GCGAACAACA TCGCTTCCAA CTGCTCGACG ACAACGACAA CCTGCTGGTC GACGGTGTGG CGGGCGAAGC CTTCGCCCAG GACGGCGTAG AAGGGCAGAT CGCGCAGCTG TTGGCCAACC CCGGGACCCG TTTCGAAGTG GTGCGCTACC CACGAATCGT GACCATTCAG GGTTATCAGG ACGCGCTGGA CATCTCCGAG CAAGGCAAGG AATCGGGGAT CATCCGTCTG GCCCTGGCCA GCAGCGACGC CGCCGAAGCG GTGAAGATCC TCAACAAGAT CGCTTCGCTG TACGTCGATC AGAACGTGCG CCGCACCTCG GCCGAAGCGG CGCAGAGCCT GGCCTTCCTG CAAAGCCAGT TGCCGCAGGT CAAACGCGAT CTGGCCAAGG CCAGCGATGC GCTCAACGCC TATCAGACCC ACGGCAAGAC CGTGAACATC TCGCTGGAAA CCCAATCGGT GCTCGGCCAG TCCGTGGCGC TCGAAACGCG GATTTCCGAG CTGAAACTGC AACAGGCGGA GATGGATCGC AAGTTCACCA AACAGCACCC GGCCTACCGC GCGCTGATGA CCCAGATTGG CGAATTGACC CAGCAACAGC GCTCGCTGGA AGGCAAGGTT CAGGACCTGC CGGCCACGCA GCAGGAACTG CTCAACCTGA CCCGCGATGT CGAAGTCGCC TCGCAGATCT ACACCCAGTT GCTGAACAAA TCCCAGGAGC TGGACATTAT CCGCGCCGGT GCCGTGGGTA ACGTGCGTCT GGTGGATACG GCGGACGTCG ACCTGACCAG CCCGGTCAAA CCGAAAAAAG CCCTGATCGT GTTGATCGCC ACCTTCCTCG GCGCCTTCGT CGGCGTGGCG CTGGTGCTGT TGCGCAAATC CCTGAGCAAG GGCCTGGAAG GGCCGGAAGC CATCGAGCAG CTCGGCTTGC CGGTCTACGC GTCGATTCCC TACAGCGCCC TGCAGCAGGA AGAGGACAGC AAAAAAGTCC GGGCCAAAGT CGCGGCGGAC ACGCCGGCGT ATCTGCTGGC CCTGCGCAAC CCGACGGACC TGTCCATCGA ATCGATCCGC AGCCTGCGCA CCTGCCTGCA CTTCGCGGCG CTGGATTCGA CCAACAACCG CATCATGATT TCCGGCCCGA GCCCGCAGGT CGGCAAGACC TTCGTCTCTT CCAACCTGGC GGCGGTCATG GCCCAGAGCG GGCAGCGCGT GGTGCTGATC GACGCCGACA TGCGCAAGGG TCATCTGCAC AAGACGCTGA ACACGCCGAT CACCAACGGC TTGTCGGATC TGCTGGTCAA GCGCTGCACC CTCGAGCAGG CGATCAACAA GGTCGAAGTC GACAACCTGC ACTTCATCAG CCGTGGCCAG GTTCCGCCTA ACCCTTCCGA ACTGTTGATG CACGCGAATT TCCGCGAACT GCTGGCGCAA CTCAGCGAGC GCTATGACGT GGTGATCATC GACACGCCAC CGCTGCTGGC GGTGACCGAT GCGGCGATTG TCGGTCGCGA AGCCGGCATC AGCCTGATTG TCGCGCGGTT CGGGGTGAAC CCGGCCAAGG AAATCGAAAT GACGATCCGG CGTTTCGCCC AGAACGGTAT CGAGTTGAAG GGCGCGGTGT TCAACGGCGT CGAGAAGCGC GCGGCCAGCT ATTACGGCAA CGGCAGCTAT TACAACTACG AATACGCGTC CGACCAGTCC TGA
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Protein sequence | MQLPSVIGTR ENDQDSIDLL GIFGSLIDQK WLIGAFTGAF MMTGVAYAIL ATPVYLANAL VQVEPKKNDM LGFSDLNSML GGQSPSVTEI GIIKSRAVIG KTVDDLRLDI DVTPNTFPLI GGFLSRRYRG ETELSVAPPR FGLSSYAWGG ERLEFAKLNL PKELLGKKLT LIAGEQHRFQ LLDDNDNLLV DGVAGEAFAQ DGVEGQIAQL LANPGTRFEV VRYPRIVTIQ GYQDALDISE QGKESGIIRL ALASSDAAEA VKILNKIASL YVDQNVRRTS AEAAQSLAFL QSQLPQVKRD LAKASDALNA YQTHGKTVNI SLETQSVLGQ SVALETRISE LKLQQAEMDR KFTKQHPAYR ALMTQIGELT QQQRSLEGKV QDLPATQQEL LNLTRDVEVA SQIYTQLLNK SQELDIIRAG AVGNVRLVDT ADVDLTSPVK PKKALIVLIA TFLGAFVGVA LVLLRKSLSK GLEGPEAIEQ LGLPVYASIP YSALQQEEDS KKVRAKVAAD TPAYLLALRN PTDLSIESIR SLRTCLHFAA LDSTNNRIMI SGPSPQVGKT FVSSNLAAVM AQSGQRVVLI DADMRKGHLH KTLNTPITNG LSDLLVKRCT LEQAINKVEV DNLHFISRGQ VPPNPSELLM HANFRELLAQ LSERYDVVII DTPPLLAVTD AAIVGREAGI SLIVARFGVN PAKEIEMTIR RFAQNGIELK GAVFNGVEKR AASYYGNGSY YNYEYASDQS
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