Gene Pfl01_3833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3833 
Symbol 
ID3714861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4334469 
End bp4335584 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content61% 
IMG OID 
Productpolysaccharide export protein 
Protein accessionYP_349562 
Protein GI77460055 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.679596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.69653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTC GTTTTTCTCT TTTATTGTTG GCAAGTATCG CTTTGCAAGG TTGCATGTTC 
TCCCCCGGCC AATACCTGAG CACCAGTAGC ATCACGCGCC AGGGCGCCAG CGAAAGCAGC
CGGGTCGAGC TCATTCCGAT CACCCCCAAG CTCATCGCCA TGAACCGCGC CACGTACAAG
CGTGAGTCGG TGCCGGCGGA GTTGTTGGCG ACCCCGGCCG AATACCGCAT CGGCAGCAAC
GATGTGCTGT ACATCACGGT CTGGGATCAT CCCGAGCTGA CCGCCCCTTC GGGTGCGCAG
CAGCAGATCG ACGCCAACGG TCGTCTGGTG CGTTCCGACG GCACGTTGTA TTACCCGTAC
ATCAAGGAAG TCCAGGCCGC CGGCAAAACC ATCCAGCAAC TGCGTTCGGA CATCGAGCAA
CGCCTCTCGG CGTTTATTGC CGAGCCGCAA GTGGATGTCG CGGTGCTGCG TTTCGCCAGT
CAGAAAGTCG TGGTCTCGGG CGCCGTGGCC AAGGCCGGCC CCCAGGCGAT TTCGACTAAT
CCGCTGAGCG TGGTCGAAGC CCTCGGCTCG GCCGGTGTCG ATACCAACAA TGCCGACTTG
TCCGGGCTGA TGCTGACGCG CAACGGGCGG GTCTATTCGC TCAATCTCGA TGCGCTCAAT
CAGCAGGATT CCGAATTGCA GAACGTCTAC CTCAAGGGGG GCGATCAGCT GTATCTGCCG
TACAACGACA ACAAGCGCAT CTACGTGATG GGCGAGGTCA ACCAGCCCCG TGCGCTGAGC
TTCAAGACCG CCACCATGAA CCTGTCCGAC GTGCTCGGGT CGGTCGGTGG CCTGAGCCAG
ACCACCTCCA ACGGCAACGC TGTGTACGTG ATTCGCGGGG TGGAAAACCT CGACGTCGAG
CCGGCGAAAA TCTATCAGCT GGAAGCCGAA TCGCCGACCG CCATGGCGCT CGCCTCGCAC
TTCGAAGTGC GGCCTCAGGA CGTGGTCTAT GTCGGGCCTG CCAACGTGAC TCGCTGGAAT
CGCCTGATCA GCCAGTTGGT GCCGTCGGCA TCGATTGTCG GGACCGGGGC TTCCGCTGCG
AAGAACTGGA GCGAATACAG TAACAACAGC AAATAA
 
Protein sequence
MTRRFSLLLL ASIALQGCMF SPGQYLSTSS ITRQGASESS RVELIPITPK LIAMNRATYK 
RESVPAELLA TPAEYRIGSN DVLYITVWDH PELTAPSGAQ QQIDANGRLV RSDGTLYYPY
IKEVQAAGKT IQQLRSDIEQ RLSAFIAEPQ VDVAVLRFAS QKVVVSGAVA KAGPQAISTN
PLSVVEALGS AGVDTNNADL SGLMLTRNGR VYSLNLDALN QQDSELQNVY LKGGDQLYLP
YNDNKRIYVM GEVNQPRALS FKTATMNLSD VLGSVGGLSQ TTSNGNAVYV IRGVENLDVE
PAKIYQLEAE SPTAMALASH FEVRPQDVVY VGPANVTRWN RLISQLVPSA SIVGTGASAA
KNWSEYSNNS K