Gene Pfl01_3829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3829 
Symbol 
ID3714857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4329199 
End bp4330593 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content60% 
IMG OID 
Productsugar transferase 
Protein accessionYP_349558 
Protein GI77460051 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTTT CTCTTCGTAT CAATCGAAAC ACCGGCCTCA AGGGACTGAC CTTTTGGGGC 
CAATGGGCGC TGGCACAGAG TTTCATTGTT TCCCTGTTGT TCATACTGGC CGAACAGCAC
ACGGGCACCG TCGAGTTCTA CTATCGGATG TGCACGATCC TGGCGGTACT GGCTTCGGTG
CCGGCTTATA CCTTCAGCGG CGCGTATCGA AAGCGAGACA ATTACCTGAC CGGGCTGGGT
CGACTGTTCA TGGGCTGGTT CATGACCATG GCCGGGCTGG CGTTCATCGC CTTCATCTGC
AAGGCCGATG CGCTGTTCTC CCGCCAGGTC ATCCTTGAGT GGGCGGTGTA CGGTTTCCTC
GGTCAGGCGC TGCTGTACGC GCCGCTGCAT GCGTTCTCGA AGTTCTACCA GCGGTCGCGC
AAAAGCGAAC ACAAGACCCT GATCGTCGGC ACCGGCGAAC TGGCACTGGG CCTGGCGAAG
AAATTGAGCC AGCATGAAAA CCTGCCGCTG GTTGGTCTGG TCAGCAACGG CGATACCCCG
TCGCTGGAAG CGGACGCCCC ACGCGTCGTC GGCGCTCAGG ACGAACTGCT TGAGCTGATC
CAGACCCACG ACATCCGCCG CTTGTACATC ACCCTGCCGC TGTCGGAAGC CGCCAAGATC
GAAGCCATGT ACGTCGATCT GCTGGATGCC AACGTTGACG TGGTCTGGGT GCCGGACCTG
AACAGCCTGA CGCTGCTCAA CCACTCGGTG AAAGTCGTGG ACGGTCTGCC GGCGATCTAC
CTCAACGAAA GCCCGTTGAC CAGCCGCCCG ACTGCTGCGC TGAGCAAGAG CCTGGTGGAA
AAAGCCGTCG CCCTGCTGGC CATAATTCTG TTGAGCCCGG TGCTGCTGGC CGTGGCGCTG
GCGGTGAAGC TCACCTCGCC GGGTCCGGTG TTCTTCAAGC AGGATCGCCA CGGCTGGAAC
GGCAAGGTGA TCAAGGTCTG GAAATTCCGC TCGATGCGCG TGCACGATGA CCGTGAGGTC
AAACAGGCCA GCCGCAACGA TTCGCGCATC ACGCCAGTCG GTCGCTTCAT CCGTCGCACT
TCGCTGGACG AGCTGCCGCA ACTGTTCAAC GTGCTGCAAG GCCACATGGC GCTGGTCGGC
CCACGCCCGC ACGCCGTGGC GCACAACAAC TACTACTCGG GCAAGATCCT CGCCTACATG
GCCCGTCACC GAATCAAACC GGGCATTACT GGCCTGGCGC AGATCAGCGG TTGCCGGGGT
GAGACAGACA CCCTCGACAA GATGGAAAAG CGTGTTGAGA TCGACCTGAA GTACATCAAT
AACTGGTCGC TGTGGCTGGA TGTGAAGATC CTGGTGAAGA CGCCGTTCAC CCTGCTGTCG
AAGGATATTT ACTGA
 
Protein sequence
MDLSLRINRN TGLKGLTFWG QWALAQSFIV SLLFILAEQH TGTVEFYYRM CTILAVLASV 
PAYTFSGAYR KRDNYLTGLG RLFMGWFMTM AGLAFIAFIC KADALFSRQV ILEWAVYGFL
GQALLYAPLH AFSKFYQRSR KSEHKTLIVG TGELALGLAK KLSQHENLPL VGLVSNGDTP
SLEADAPRVV GAQDELLELI QTHDIRRLYI TLPLSEAAKI EAMYVDLLDA NVDVVWVPDL
NSLTLLNHSV KVVDGLPAIY LNESPLTSRP TAALSKSLVE KAVALLAIIL LSPVLLAVAL
AVKLTSPGPV FFKQDRHGWN GKVIKVWKFR SMRVHDDREV KQASRNDSRI TPVGRFIRRT
SLDELPQLFN VLQGHMALVG PRPHAVAHNN YYSGKILAYM ARHRIKPGIT GLAQISGCRG
ETDTLDKMEK RVEIDLKYIN NWSLWLDVKI LVKTPFTLLS KDIY