Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3810 |
Symbol | |
ID | 3714838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4310828 |
End bp | 4312546 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | copper-resistance protein CopA |
Protein accession | YP_349539 |
Protein GI | 77460032 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.87992 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCA CCACCTCAAG ACGCACCTTC GTCAAAGGCC TCGCCGCCGG CAGTCTGCTC GGCGGCCTCG GCCTGTGGCG CACGCCGGTC TGGGCCTTGA ACAGCCCCGG CCAGGTGAAC GAGTTAAGCG GCACCGACTT CGAGCTGTTC ATCGGCGAAA CCCCGGTCAA CTTCACCGGC CAGCCCCGCA CCGCCCTGAC CATCAACGGC AGCCTGCCCG GCCCGCTGCT GCGCTGGCGC GAAGGCGACA CCGTGACGCT GCGGGTGCGC AACCGGCTCA AGGACAGCAC GTCGATCCAC TGGCACGGCA TCCTGCTGCC GGCCAACATG GACGGCGTGC CGGGCCTGAG TTTCAAGGGC ATCGAGCCGG GTGGCGTGTA CGTTTACCAG TTCAAGGTTC GCCAGCACGG CACCTACTGG TATCACAGCC ATTCCGGCTT GCAGGAGCAG GCCGGGGTCT ACGGGCCGCT GGTGATCGAT GCGCGGGAAC CAGAGCCGTT CCAGTACGAC CGCGACTACG TGGTGATGCT CAGTGACTGG ACCGACGAAG ACCCGGCCAG CCTGATGAAG ACCCTGAAAA AACAGTCCGA CTACTACAAC TTCCACAAGC GCACCGTCGG CGACTTCGTC CACGACGTCG GCGAAAAAGG CTGGGGCGCC ACCGTCGCCG ATCGCACGAT GTGGGCGCAG ATGAAGATGA ATCCCACCGA CATCGCTGAC GTCAGCGGTG CGACCTACAC CTTCCTGATG AACGGCCACG CCCCAGATGA CAACTGGACC GGCCTGTTCC GCCCCGGTGA AAAGCTGCGT CTGCGGCTGA TCAACGGCTC GGCCATGAGC TACTTCGACG TGCGCATTCC CGGATTGAAA ATGACCGTGG TCGCCGCCGA TGGCTTGCAC GTCAAACCGG TCAGCGTCGA CGAGTTGCGC ATCGCCGTGG CGGAAACCTA TGACGTGATC GTCGAACCCG CCGCCGACGC CTACACCCTG TTCGCCCAAG CCATGGACCG CACCGGTTAC GCCCGAGGCA CCCTCGCCGC CCGCGCCGGT TTGTCGGCCC CGGTGCCGGC GCTGGATCCG CGACCGCTGG TGACCATGGA CGACATGGGT ATGGGCGGCA TGGGCTCTGG TGGAATGAAT CATGGTTCCA TGGACATGAG CGGCATGGAT CACTCAAGCA TGAACATGGG CCCGATGCAG TCGCACCCCG ACAGCGAAAA GGACAACCCG CTGGTGGACA TGCAAGCCAT GACCACCGCC GCGAAACTCG ACGACCCCGG CCTCGGCCTG CGCAACAACG GTCGCCGGGT GCTGACCTAC GCCGACCTGC GCAGCACGTT CGAAGACCCG GACGGCCGCG ACCCGAGTCG CACCCTCGAG CTGCACCTCA CCGGCCACAT GGAGAAATTC GCCTGGTCGT TCAACGGCAT CAAGTTCTCC GACGCCGAGC CTCTGCTGTT GAAGTACGGC GAGCGGATTC GCCTGGTGCT GGTCAACGAC ACGATGATGA CTCACCCCAT CCACCTGCAC GGCATGTGGA GCGATCTGGA AGACGAAAAC GGCAATTTCC AGGTGCGCAA ACACACCATC GACATGCCGC CCGGCACCCG CCGCACTTAC CGCGTGACCG CCGACGCGCT CGGCCATTGG GCCTATCACT GCCATCTCCT GTACCACATG GAAATGGGCA TGTTCCGCGA AGTGCGGGTG GAAGAATGA
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Protein sequence | MPSTTSRRTF VKGLAAGSLL GGLGLWRTPV WALNSPGQVN ELSGTDFELF IGETPVNFTG QPRTALTING SLPGPLLRWR EGDTVTLRVR NRLKDSTSIH WHGILLPANM DGVPGLSFKG IEPGGVYVYQ FKVRQHGTYW YHSHSGLQEQ AGVYGPLVID AREPEPFQYD RDYVVMLSDW TDEDPASLMK TLKKQSDYYN FHKRTVGDFV HDVGEKGWGA TVADRTMWAQ MKMNPTDIAD VSGATYTFLM NGHAPDDNWT GLFRPGEKLR LRLINGSAMS YFDVRIPGLK MTVVAADGLH VKPVSVDELR IAVAETYDVI VEPAADAYTL FAQAMDRTGY ARGTLAARAG LSAPVPALDP RPLVTMDDMG MGGMGSGGMN HGSMDMSGMD HSSMNMGPMQ SHPDSEKDNP LVDMQAMTTA AKLDDPGLGL RNNGRRVLTY ADLRSTFEDP DGRDPSRTLE LHLTGHMEKF AWSFNGIKFS DAEPLLLKYG ERIRLVLVND TMMTHPIHLH GMWSDLEDEN GNFQVRKHTI DMPPGTRRTY RVTADALGHW AYHCHLLYHM EMGMFREVRV EE
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