Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3787 |
Symbol | |
ID | 3714719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4285417 |
End bp | 4286130 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349516 |
Protein GI | 77460009 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.206629 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.405224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATC AAGCACTCAA GGCCTTGTTC GACCAGCAGT CCGCCGTCTA TGACAAACAG TGGAGCGGCA TGGCGCCGCT TCGTGATGCC CTGTATTTGC TGCTGGATTC GGTGTTTGTG GGCCTGCCGG AGAATGCCCG GATACTCTGC GTTGGCGTGG GCACCGGTGT GGAAATGGCC CATCTGGCGC AGCAGTTTCC CGGCTGGCGA TTCACTGCAG TCGACCCTTC GGGCGCCATG CTCGACGTGT GCCGTAAGCG AGCGAAAGAG GGTGGTTTCA TTGACCGCTG CCGGTTTCAC GAAGGCTACC TCGATACGCT GACGGATGAA TCCGGTTACG ACGGCGCGAC CTGTTTTCTG GTGTCGCAGT TTTTGCTCGA CCCTCAGGTG CGTATCGGCT TTTTCCATGA GATTGCCCGT CGTCTGGTGC CGGGTGGAAT TCTGGCTAAC GCTGATCTCG CCTCGGATAC CGAATCACCG GCCTATGAAG CATTGCTGCG TCACTGGATG ACGCTGATGG CATCGGCCCA GGTGCCAGTG GAGATGCTCG AGCGAGCGCG TTCGGCCTAT GCCCGGGATG TGGCGATTCT GCCGGCGCCG CAGGTCGCCG GTCTGATCGA GTCGGCCGGG TTCGAGACAC CGATCCAGTT CTTTCAGGCG GGTTTGATGC ATGGGTGGTT CTGCCCACGC AAGGCAGGGA TTGCCGCGAA TTAG
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Protein sequence | MDNQALKALF DQQSAVYDKQ WSGMAPLRDA LYLLLDSVFV GLPENARILC VGVGTGVEMA HLAQQFPGWR FTAVDPSGAM LDVCRKRAKE GGFIDRCRFH EGYLDTLTDE SGYDGATCFL VSQFLLDPQV RIGFFHEIAR RLVPGGILAN ADLASDTESP AYEALLRHWM TLMASAQVPV EMLERARSAY ARDVAILPAP QVAGLIESAG FETPIQFFQA GLMHGWFCPR KAGIAAN
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