Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3784 |
Symbol | |
ID | 3714716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4281261 |
End bp | 4283684 |
Gene Length | 2424 bp |
Protein Length | 807 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | TonB-dependent siderophore receptor |
Protein accession | YP_349513 |
Protein GI | 77460006 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.894959 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAAAACT CCACCGCCAA AAACAATAAA TCCCCTTGGT TACCGCTGGC GCTCGCGCTG GCGGTCAACG CCGCCATGCC GATGGCTTTC GCCGCCGAAG CCATTCACAT CCGCGCCCAG CCGCTGGGTC AGGCCCTGAG CGAACTGGGT CAGCAAACGT CATTGCAGGT GTTTTTCAGC CCGGACCTGG TCGCCGGCAA ACAGGCGCCG GCGGTGGACG GTAACCTTTC TCCGGAGCAG GCCCTGCGCC AATTGCTGCA AGGCAGCGGT CTGGATTATC AGATCAATGA AGGTTCGGTG ACCTTGTCCC CAGCCCCGAC TTCCGCCGCC AACGGCCCGC TGGAGTTGGG CGTGACCGAC ATCAAGGTGG TCGGCGACTG GCTCGGCGAC GCCGACGCCG CCGTGGTGCA GAACCACCCC GGCGCGCGCA CCGTGATCCG CCGCGAAGCG ATGGTCGAGC AGGGCGCTAT GAACGTCGGC GACGTGCTGC GCCGCGTGCC GGGCGTGCAG GTGCAGGAAG CCAACGGCAC CGGCGGCAGC GACATATCGC TGAACGTCGG CGTACGAGGT TTGACGTCGC GCCTGTCGCC ACGCTCCACG GTGTTGATCG ACGGCGTGCC GGCTGCATTC GCCCCGTATG GCCAGCCACA ACTGTCGATG GCGCCGATTT CTTCCGGCAA CCTCGACAGC ATCGACGTGG TCCGTGGTGC CGGCTCCGTG CGTTACGGGC CGCAGAACGT CGGCGGTGTG ATCAACTTCG TGACCCGCGC GATCCCGGAA AAAACCACCG GTGAAATCGG CACCACCCTC GAAACCTCGC AGCATGGTGG CTGGAAACAC ATCGACACCG CGTTCCTCGG CGGCACCGCC GACAATGGCA TCGGCATGGC GCTGTTGTAT TCGGGCGTCA ACGGCAACGG TTACCGCGAG CGCAACAACG GCAACGACAT CGACGACGTG ATCCTCAAGA CCCACTGGGC GCCGACCGAG CAGGACGATT TCAGCCTCAA CTTCCACTAC TACGACGCCA GCGCCGACAT GCCCGGTGGC CTGACGCAGA AGCAGTACGA CGACAAACCG TTCCAGTCCG ACCGCGACTA CGACGGCTTC AGCGGCCGCC GCAAGGACGT GTCGTTCAAG TGGATCCGGC AGATCGACGA GCGTACCCAG GCGGAAGTGC TGACCTACTA TTCCGACAGC TTTCGCGGCA GCACCATCGC CGCCCGCGAT CAGAAAACCC TCAGCTCGTT CCCGCGTTCC TACTACACGC TGGGCATCGA GCCGCGTGTC TCGCGTGTGT TCGACGTCGG CCCGACCACC CAGGAAGTCA GCGTCGGTTA CCGTTATCTG AAAGAGGCGA TGCACGAGCA ATCGAGCCGT CTGGCGCTGG TCAACAATGT GCCAGTGGTC ACCAAGACCT CCGATGGTCA TGTGTTCCAG GACCGCACCG GTGGCACCGA GGCCAACTCG GTGTACATCG ACAACAAGAT CGACGTCGGC AACTGGACCG TGACTCCGGG CATTCGCTTC GAACACATCA GCACCGACTG GCATGATCGC GCCGTGCTCG ATACCGCAGG CAAACGCGTG CCGGAAAAAA ACCGCAGCAT CGAAAGCAAT GAGCCGCTGC CGGCCCTGAG CGTCATGTAT CACCTGTCCG ATGCGTGGAA GCTGTTCGCC AACTACGAGA CATCGTTCGG CAGCCTGCAG TACTTCCAGC TCGGCCAGGG CGGCTCGGGT GACCAGACCG CCAATGGCCT GGAGCCGGAG AAAGCCAAGA CCTACGAAAT CGGCACGCGC TACAACGATG ACGTGTGGGG CGGGGAAGTG ACGCTGTTCT ACATCGACTT CGATGACGAG CTGCAATACA TCAGCAATGA CGTGGGCTGG ACCAACCTCG GCGCGACCAA GCACCAGGGT ATCGAAGCGT CGGTGCACTA CGACATGGCG GCGCTTGACC CGCGCCTTGA TGGCCTGACC GCCAACGCCG GTTTCACTTA CACCCGCGCG ACCTACGAAG GCGAGATCCC GGGCTTCAAG GGCCGCGACC TGCCGTTCTA CTCGCGTCAG GTGGCGACCG TCGGCCTGCG TTACGACATC AACCGCTGGA CCTACAACAT CGACGGCTTC GCCCAGTCCA AACAGCGCTC GCCTGGCACC GGCGTGAATG CTGATGGCAG CTTCAATGGC AATTACATCA CCGAAGGCAC GGCGGACGGG CAGTACGGCG ACATTCCGGG CTACGTGACC TGGAACGTGC GCGGCGGCTA TGACTTCGGT TCGCAGCTGT CGAACCTGAA GCTCGGCGCC GGGGTGAAAA ACATCTTCGA CAAGCAGTAC TTCACTCGCT CCAGCGACAA CAACTCGGGG ATCTACGTGG GCACGCCACG GACGTTCTTC GTGCAGGCCA GCGTCGGTTT CTGA
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Protein sequence | MKNSTAKNNK SPWLPLALAL AVNAAMPMAF AAEAIHIRAQ PLGQALSELG QQTSLQVFFS PDLVAGKQAP AVDGNLSPEQ ALRQLLQGSG LDYQINEGSV TLSPAPTSAA NGPLELGVTD IKVVGDWLGD ADAAVVQNHP GARTVIRREA MVEQGAMNVG DVLRRVPGVQ VQEANGTGGS DISLNVGVRG LTSRLSPRST VLIDGVPAAF APYGQPQLSM APISSGNLDS IDVVRGAGSV RYGPQNVGGV INFVTRAIPE KTTGEIGTTL ETSQHGGWKH IDTAFLGGTA DNGIGMALLY SGVNGNGYRE RNNGNDIDDV ILKTHWAPTE QDDFSLNFHY YDASADMPGG LTQKQYDDKP FQSDRDYDGF SGRRKDVSFK WIRQIDERTQ AEVLTYYSDS FRGSTIAARD QKTLSSFPRS YYTLGIEPRV SRVFDVGPTT QEVSVGYRYL KEAMHEQSSR LALVNNVPVV TKTSDGHVFQ DRTGGTEANS VYIDNKIDVG NWTVTPGIRF EHISTDWHDR AVLDTAGKRV PEKNRSIESN EPLPALSVMY HLSDAWKLFA NYETSFGSLQ YFQLGQGGSG DQTANGLEPE KAKTYEIGTR YNDDVWGGEV TLFYIDFDDE LQYISNDVGW TNLGATKHQG IEASVHYDMA ALDPRLDGLT ANAGFTYTRA TYEGEIPGFK GRDLPFYSRQ VATVGLRYDI NRWTYNIDGF AQSKQRSPGT GVNADGSFNG NYITEGTADG QYGDIPGYVT WNVRGGYDFG SQLSNLKLGA GVKNIFDKQY FTRSSDNNSG IYVGTPRTFF VQASVGF
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