| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3782 |
|---|
| Symbol | |
|---|
| ID | 3714714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4278405 |
|---|
| End bp | 4279556 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_349511 |
|---|
| Protein GI | 77460004 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.756494 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCC TCACCCCTCA AGACACGTTC GTTCCCGGAC GCCTCGAACA GATGTCCACG
CGCATCGCCT TCTTCATCGC CGGGCTCGGC ATCGCCGCGT GGGCGCCGCT GGTGCCCTAC
GCCAAGGCGC GCGCCGGGCT CGATGAAGGG ACGCTGGGGT TGCTGTTGCT GTGCCTGGGC
GTCGGTTCGA TTCTGGCAAT GCCGCTGGCG GGGATTCTGG CCACCCGGTT CGGCTGTCGG
AAGGTGGCCA CCGGCGGCAC GCTGCTGATC TGCGCGGCGT TGCCGTTGCT GGCGACGGTG
TCGTCGATTC CGGCGTTGAT TGCCACGTTG TTCATGTTTG GCGCCGGGCT CGGTACGGTG
GATTCGACGG TGAACCTGCA AGCGGTGATC GTCGAGCGGG CCAGCGGCAA GAACATGATG
TCGGGGTTCC ACGGCCTGTT CAGCCTCGGC GGGATCGTCG GTGCAGCGGG CGTGAGCGCC
CTGCTCGGTC TCGGGCTGTC GCCATTGGCG GCGATGCTGG TGGTGGTCGT GGTGTTGATC
GCGGCGCTGT TCAAGGCGGT GCCGCACATG TTGCCTTACG GCAGTGAAAG CTCGGGACCG
GCGTTCGCGG TGCCCCACGG GATCGTGCTG TTCATCGGCG GCATGTGCTT CATCGTGTTC
CTCACCGAAG GCGCGGCGCT GGACTGGAGC GCGGTGTTTC TGGCGCAGGA ACGCGGGATC
GATACGGCGT ATGCAGGGCT GGGTTATGCC GCGTTCGCGC TGACGATGAC TGCGGGCCGC
TTGACCGGTG ACCGGATCGT TCGCGCATTG GGCGCAACCC GGATCATTCT GTTCGGTGGC
CTGCTGGCGG CGGCGGGTTT GTTTCTGGCG ACATTCGCCC CGAGCTGGGA AGCCGCACTG
GTCGGTTATG CACTGGTCGG TGCCGGGTGT TCGAACATCG TGCCGGTGCT GTACACGGCG
GTGGGCAAGC AGACGGTGAT GCCGGAAAGC ATCGCCGTGC CGGCAATCAC TACGCTGGGT
TATGCGGGGA TTCTGGCGGG GCCGGCGGTG ATCGGGTTTG TCGCCCATGC CAGCAGTCTG
AGTTTCGCCT TCGGGTTGAT GGCGACGTTG CTGGTGGCGG TGGCGATTGG CGGCAAAGCG
CTCAAGGTCT GA
|
|---|
| Protein sequence | MTSLTPQDTF VPGRLEQMST RIAFFIAGLG IAAWAPLVPY AKARAGLDEG TLGLLLLCLG
VGSILAMPLA GILATRFGCR KVATGGTLLI CAALPLLATV SSIPALIATL FMFGAGLGTV
DSTVNLQAVI VERASGKNMM SGFHGLFSLG GIVGAAGVSA LLGLGLSPLA AMLVVVVVLI
AALFKAVPHM LPYGSESSGP AFAVPHGIVL FIGGMCFIVF LTEGAALDWS AVFLAQERGI
DTAYAGLGYA AFALTMTAGR LTGDRIVRAL GATRIILFGG LLAAAGLFLA TFAPSWEAAL
VGYALVGAGC SNIVPVLYTA VGKQTVMPES IAVPAITTLG YAGILAGPAV IGFVAHASSL
SFAFGLMATL LVAVAIGGKA LKV
|
|---|
| |