Gene Pfl01_3754 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3754 
Symbol 
ID3714686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4242244 
End bp4243347 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content62% 
IMG OID 
ProducttRNA 2-selenouridine synthase 
Protein accessionYP_349483 
Protein GI77459976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0900033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCATCG ACGTCACCGA CTACCGCGAC ATCTTCCTCA ACGACCGGCC GCTGATGGAC 
GCCCGTGCGC CGGTCGAGTT TCACAAGGGC GCGTTTCCAG GGGCGGTCAA TCTGCCGCTG
ATGAATGACA TCGAGCGCCA GCGGGTCGGC ACTTGCTACA AGCATCACGG TCAGCAGGCA
GCCATTGAGC TGGGTCATCA ACTGGTGTCC GGCCCGGTGA AGGAAGAGCG TATCCAGGCC
TGGGCGGAGT TTGCCCGGAC GCATCCCGAG GGTTATCTGT ATTGCTTTCG TGGCGGCCTG
CGTTCGCAAA TCGTGCAGCA GTGGCTGAAG TCGGAAGCCG GCGTCGATTA CCCGCGTATC
GGCGGTGGCT ACAAGGCACT GCGGGGTTTT CTGATCGACA CTCTTGAATC AGCCTTGACC
GACTGTGATT TCGTGCTGCT GGGCGGCATG ACCGGCACCG GCAAGACCGA AGTGCTGGCG
CAACTGCGCA ACAGCGTGGA TCTGGAAGGC CATGCCAATC ACCGGGGCTC AAGTTTCGGC
AAGCGCGCCA CCGGTCAGCC GTCGAACATC GATTTCGAGA ATCGGCTGGC CATCGACTTG
CTGAAAAAAC GCGCTGCCGG CATCGATCAA TTTGTGCTGG AGGATGAGAG CCGGGTGGTC
GGCAGCTGCG CGTTGCCCTT GCCGTTGTAT CAGGGCATGC AGCAGTACCC GATGGTCTGG
CTCGAAGATC GTTTCGAGCA GCGCGTCGAG CGGATCCTGC GCGATTACGT GGTGGATTTG
TCTGCCGAGT TTCAGGCTGT GCATGGGGAG GAAGGCTTCG GGCGGTTTTG CGAGCGTTTG
CTGGAGAGCC TCGACAACGT GCACAAGCGC CTGGGCGGCG AGCGGCATCG ACGGATGCGG
GTGTTGATGG AGGAGGCGCT GGCGGAGCAG GGCCGCAGCG GGGCGGTGGA GTTGCATCGC
GCGTGGATCG AGGGCTTGCT GCGCGAGTAT TACGACCCCA TGTATGTGTT TCAGCGCGAG
AAGAAGGGCG GGCGGATCGA GTTTGCCGGG GAGCGGCAGG CCGTTATCGA GTACCTGCGT
CAACGGGGCA AATCCCAGGC CTGA
 
Protein sequence
MSIDVTDYRD IFLNDRPLMD ARAPVEFHKG AFPGAVNLPL MNDIERQRVG TCYKHHGQQA 
AIELGHQLVS GPVKEERIQA WAEFARTHPE GYLYCFRGGL RSQIVQQWLK SEAGVDYPRI
GGGYKALRGF LIDTLESALT DCDFVLLGGM TGTGKTEVLA QLRNSVDLEG HANHRGSSFG
KRATGQPSNI DFENRLAIDL LKKRAAGIDQ FVLEDESRVV GSCALPLPLY QGMQQYPMVW
LEDRFEQRVE RILRDYVVDL SAEFQAVHGE EGFGRFCERL LESLDNVHKR LGGERHRRMR
VLMEEALAEQ GRSGAVELHR AWIEGLLREY YDPMYVFQRE KKGGRIEFAG ERQAVIEYLR
QRGKSQA