Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3746 |
Symbol | |
ID | 3714658 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4234730 |
End bp | 4235284 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | RNA polymerase sigma factor |
Protein accession | YP_349475 |
Protein GI | 255961268 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.352624 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCTA GATTGCAGGA CATGCCATTA CCCGAAACCG CGTTCGATTA CGAAGCCCGC CTCGCCGCCT GTGCCCGCGG CGAGCGCGGG GCCCTGCGCG AATTGTATGT GCAGGAAAGC CCGCGGCTGC TCGGTGTGGC CCGGCGTCTG GTGCGAGACA CGGCGCTGGC CGAAGACATC GTTCACGACG CATTCATCAA GATCTGGGCT GGCGCGTCGG GGTTCGATCC GGCGCGCGGT TCGGCCCGGG GCTGGATGTT CAGCGTGACC CGCCATCTGG CGCTGAATGT GCTGCGCAAT CACGACCGGG AAACGCCGTT GAACGACAGC AACGAATCTC CGGCGATTGA TGACGACTTC GATGCGCTGG CGCAATCGAC CCGCATCCAT CGCTGCCTGC ATCAACTGGA ACCGCAACGC CGCCGCTGCA TCCTTCACGC CTACGTCGAC GGTTACAGCC ACGCACAGAT CGCCCAACGC CTCGACACGC CGCTGGGCAC CGTCAAAGCC TGGATCAAGC GCAGCCTCAA TGCGTTGCGG GAGTGCATGG GATGA
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Protein sequence | MLARLQDMPL PETAFDYEAR LAACARGERG ALRELYVQES PRLLGVARRL VRDTALAEDI VHDAFIKIWA GASGFDPARG SARGWMFSVT RHLALNVLRN HDRETPLNDS NESPAIDDDF DALAQSTRIH RCLHQLEPQR RRCILHAYVD GYSHAQIAQR LDTPLGTVKA WIKRSLNALR ECMG
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