Gene Pfl01_3746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3746 
Symbol 
ID3714658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4234730 
End bp4235284 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content64% 
IMG OID 
ProductRNA polymerase sigma factor 
Protein accessionYP_349475 
Protein GI255961268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.352624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCTA GATTGCAGGA CATGCCATTA CCCGAAACCG CGTTCGATTA CGAAGCCCGC 
CTCGCCGCCT GTGCCCGCGG CGAGCGCGGG GCCCTGCGCG AATTGTATGT GCAGGAAAGC
CCGCGGCTGC TCGGTGTGGC CCGGCGTCTG GTGCGAGACA CGGCGCTGGC CGAAGACATC
GTTCACGACG CATTCATCAA GATCTGGGCT GGCGCGTCGG GGTTCGATCC GGCGCGCGGT
TCGGCCCGGG GCTGGATGTT CAGCGTGACC CGCCATCTGG CGCTGAATGT GCTGCGCAAT
CACGACCGGG AAACGCCGTT GAACGACAGC AACGAATCTC CGGCGATTGA TGACGACTTC
GATGCGCTGG CGCAATCGAC CCGCATCCAT CGCTGCCTGC ATCAACTGGA ACCGCAACGC
CGCCGCTGCA TCCTTCACGC CTACGTCGAC GGTTACAGCC ACGCACAGAT CGCCCAACGC
CTCGACACGC CGCTGGGCAC CGTCAAAGCC TGGATCAAGC GCAGCCTCAA TGCGTTGCGG
GAGTGCATGG GATGA
 
Protein sequence
MLARLQDMPL PETAFDYEAR LAACARGERG ALRELYVQES PRLLGVARRL VRDTALAEDI 
VHDAFIKIWA GASGFDPARG SARGWMFSVT RHLALNVLRN HDRETPLNDS NESPAIDDDF
DALAQSTRIH RCLHQLEPQR RRCILHAYVD GYSHAQIAQR LDTPLGTVKA WIKRSLNALR
ECMG