Gene Pfl01_3680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3680 
Symbol 
ID3715126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4164159 
End bp4165484 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content63% 
IMG OID 
Productgeneral substrate transporter 
Protein accessionYP_349409 
Protein GI77459902 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC ACATCGGCAC CCTTGCGCGT TGGCGCATGC AGATCTTCGC TGTCACCTGG 
CTCGCTTACG CCGCGTTCTA TTTCACCCGC AAAGCCTTTT CGGTGGCCAA ACTGGGCATC
GCCGAAGACC CGAGTTTCAC CCTCGACAAA ATGGCCATGG CCAACCTCGA CGCGATTTAC
CTGGCGGCCT ACGCCATCGG CCAGTTCACC TGGGGCATGC TCGCCGACCG CTTCGGCCCA
CGGATCGTGG TGCTTGGCGG GTTGCTGATT TCCGCTGCGG CAGCGCTGGT GATGGGCAGT
TTTGCGACCT TGCCGATCTT CGCCACCTGC ATGTTGATTC AGGGCCTGGC GCAGTCCACC
GGTTGGTCGG GGTTGTGCAA GAACCTCGGT AGTTTTTTCC CTTCGGAACA GCGCGGGCGA
GTGCTCGGGT TGTGGAGTTC CTGCTACGCC TTCGGTGGAT TGGTGGCCTC GCCGTTCGCC
GGTTGGTGGG CGTACACGCT GGTCGGCACC TGGCACGCGG CGTTCATTTC CAGTGCGGCG
GTGGTCGCGG CGGTGGCGGT GTTGTTCTTC ATCTTTCAGC GCAACAAACC GGAAGATGTC
GGCCTGCCGG CGGTGGAACC GGAACCGGTC ATCAGTGCCG AGGAAGCCGA AGCCAACAGC
AAACTCAGCG TGTGGGAACC GCTCAAGGAA ATCCTGCGTA ACCGCACGGT GCTGGTGTTG
GGTCTGGCGT ATTTCCTGTT GAAACCGGCG CGTTACGCGA TTCTGCTGTG GGGCCCGGTG
ATCGTGTTCG AACAGATGCC TTCGGTCGGC AAGGTTGGCG CGGCGATCAT TCCCACGGCG
TTTGAACTGG CCGGTCTGCT GGGTCCGATC ATGATCGGCC TGGCCTCGGA CAAACTGTTC
GGTGCCCGAC GCATGCCGGC CTGCGTGTTG AGTCTGCTGG CGCTGACCGT GACCCTTGCG
CTGTTCATGG GCGCCTTGCA CACCGGCAGC GTGATGCTGG TGGTCGCATT GTTGTTCGTG
ATGGGCCTGA CCCTGTACGG CCCGGACTCA ATGATCAGCG GCGCGGCCGC GATCGATTTC
GGCAAGGCCA AGGCCGGCGC CACGGCGGCG GGATTCGTCA ACGGCTGCGG CTCGGTCGGT
GCGGTGCTCG GTGGTTTGCT GCCGGGTTAC TTCGACTCGG TGACGGTGTT CATCGTGTTC
GCCGGTTGTG CGCTGTTCTC GGCGCTGGTG CTGATTCCAC ACTGGAACAG CCGCCCGGTC
GGCGTCATGG AACCGCGCGC CTACGTGCCC AATCGTGCCC TGACCGTCAA ACCCCTGCGT
AACTGA
 
Protein sequence
MNKHIGTLAR WRMQIFAVTW LAYAAFYFTR KAFSVAKLGI AEDPSFTLDK MAMANLDAIY 
LAAYAIGQFT WGMLADRFGP RIVVLGGLLI SAAAALVMGS FATLPIFATC MLIQGLAQST
GWSGLCKNLG SFFPSEQRGR VLGLWSSCYA FGGLVASPFA GWWAYTLVGT WHAAFISSAA
VVAAVAVLFF IFQRNKPEDV GLPAVEPEPV ISAEEAEANS KLSVWEPLKE ILRNRTVLVL
GLAYFLLKPA RYAILLWGPV IVFEQMPSVG KVGAAIIPTA FELAGLLGPI MIGLASDKLF
GARRMPACVL SLLALTVTLA LFMGALHTGS VMLVVALLFV MGLTLYGPDS MISGAAAIDF
GKAKAGATAA GFVNGCGSVG AVLGGLLPGY FDSVTVFIVF AGCALFSALV LIPHWNSRPV
GVMEPRAYVP NRALTVKPLR N