Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3658 |
Symbol | |
ID | 3715085 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4141127 |
End bp | 4141942 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | gamma-carboxygeranoyl-CoA hydratase |
Protein accession | YP_349387 |
Protein GI | 77459880 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.551488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0572625 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACT TCAACACCCT CGAATTGCAC AGCGACCCAC GGGGTTTCGC GACCCTGTGG CTGAGCCGCG AAGAAAAAAA CAACGCGTTC AACGCCGAGA TGATCCGCGA ACTGATCCTG GCTTTGGACA AGGTCGCCAG CGACGCCAGC CTGCGTTTCC TACTGGTGCG CGGACGCGGC AAACACTTCA GCGCCGGCGC CGATCTGGCC TGGATGCAGC AATCGGCCGA ACTCGATTAC CACACCAACC TCGACGACGC CCGGGAACTG GCGGAGCTGA TGTACAACCT TGCCAAACTG AAAATCCCGA CCGTGGCCGT GGTTCAAGGC GCGGCGTTCG GTGGCGCGCT GGGCCTGATC AGTTGCTGCG ACATGGCGAT TGGCGCCGAT GACGCGCAGT TCTGCCTGTC GGAAGTGCGC ATTGGCCTGG CGCCGGCGGT GATCAGTCCG TTCGTGGTGC AAGCCATCGG CGAACGGGCG GCGCGGCGTT ATGCGCTGAC GGCCGAGCGA TTCGGCGGAC AGCGGGCGCG GGAAATCGGT TTGTTGTCCG AGAGCTATCC AGCGACCGAG CTTGAACAGA AAGTCGAGCA ATGGATCGAC AACCTGCTGC TCAACAGCCC CGCCGCCATG CGCGCCAGCA AGGATCTGCT GCGTGAAGTC GGCAACGGCG CGCTGACCCC GGCACTGCGT CGCTACACCG AAAATGCCAT CGCCCGCATC CGCGTCAGCC CGGAAGGCCA GGAAGGTCTG CGGGCCTTTC TGCAGAAGCG TCCGCCGAGC TGGCAAGCCG CAATCACCAC CAAGGAGCCG CGTTGA
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Protein sequence | MSDFNTLELH SDPRGFATLW LSREEKNNAF NAEMIRELIL ALDKVASDAS LRFLLVRGRG KHFSAGADLA WMQQSAELDY HTNLDDAREL AELMYNLAKL KIPTVAVVQG AAFGGALGLI SCCDMAIGAD DAQFCLSEVR IGLAPAVISP FVVQAIGERA ARRYALTAER FGGQRAREIG LLSESYPATE LEQKVEQWID NLLLNSPAAM RASKDLLREV GNGALTPALR RYTENAIARI RVSPEGQEGL RAFLQKRPPS WQAAITTKEP R
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