Gene Pfl01_3650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3650 
Symbol 
ID3715077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4130548 
End bp4131882 
Gene Length1335 bp 
Protein Length444 aa 
Translation table11 
GC content61% 
IMG OID 
ProductOmpA/MotB 
Protein accessionYP_349379 
Protein GI77459872 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.61237 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0662024 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGC GTGTTCTGTT CGTCTTTCTC CTGAGCGCCT GGCTGCAGGT TTCGGCCGCG 
GCATTGCCCA TTCCCGAGAA CGGCCCGGTA TTGCGCATCC AGGGTTCCAA CACCATTGGC
GCGGCGCTCG GCCCGGCGTT GGTGGAAGGC CTGTTGCAAG ACCAGGGACT GTTGAAAGTC
CACAGCGAAA CCCCGGACAC CGCCAACGAA CAACGGATCG TCGGCCTGAC GGCCCAAGGC
CAAAGGGTCG TGGTGGAGAT CGCCGCCCAC GGTTCGAGCA CCGGTTTCAC TGCACTCAAG
AACGCCAGCG CCGATCTGGC CGCCTCGTCG CGCCCGATCA AGGACAGCGA ACTGCTGAAC
CTGCAAGCCC GGGGCGATCT GAAAAGCCCC GGTGCCGAGC AAGTCATCGC CATCGATGGT
CTGGCGATCA TCCTTCACCC CGACAATTCG CTGAATCAAC TGAACACCGA ACAACTGGCG
CGAATCTTCA GCGGCGAGGC GAAGACGTGG GAAGACGTCG GCGGCAAGGG TGGGACGATT
CATTTATATG CGCGGGATGA TCAGTCCGGT ACGTACGACA CGTTCAAGGA ACTTGTCCTC
AGTCGTCGTG GGAAATCCCT GAGCAATGCC GCGAAACGGT TTGAATCCAG CGAGCAGTTG
TCCGACGCAG TCAGTGCCGA TCCGCAGGCC ATCGGTTTCA TCGGCCTGCC CTATGTGCGT
CAGGCCAAAG CCGTGGCGAT TGTCGACGGG CAGTCCCAGG CAATGCTGCC GCTCGCCAGC
CTGATCGCCA CCGAAGACTA TCCACTGTCG CGGCGGCTGT TCTTCTATCT GCCGCCCGAC
AGCAACAATC CCTGGGCCAG GGCGTTGGTG GAGTTTGCGC AGAGCCGCCA GGGTCAGGCG
ATTGTCGCGG CCAACGGTTT TATCGCCCAG ACCGTGCAGG CTATCGCCGT CACGCCGAAT
GCGCTGATGC CCGAGGGTTA TCAATCCCTC AGCCGCCACG CCCAGCGTCT GACGGTGAAC
TTCCGCTTCG AAGAAGGTAG CGCCAGCCTC GACAACAAGG CCCGTCAGGA TCTGGCCCGG
GTGTTCGACT ATATAAAGCA CCACGACAAG ACCGACCGCG CGGTAACACT GGTGGGCTTC
GGCGACGCCA AAGACGACCC GGCACGGGCT GATTTACTGT CGAAGCTGCG GGCGATGGCG
GTACGCCGAG AGTTGGTGAA AAACGGCGTG GTATTGCGCG AAGTGCGGGG GTTTGGCGCG
CTGATGCCGG TGGCAACCAA CAGCGGTGAT GAAGGCAGGA TCAAGAATCG GCGGGTTGAG
GTTTGGGTTT ACTGA
 
Protein sequence
MTLRVLFVFL LSAWLQVSAA ALPIPENGPV LRIQGSNTIG AALGPALVEG LLQDQGLLKV 
HSETPDTANE QRIVGLTAQG QRVVVEIAAH GSSTGFTALK NASADLAASS RPIKDSELLN
LQARGDLKSP GAEQVIAIDG LAIILHPDNS LNQLNTEQLA RIFSGEAKTW EDVGGKGGTI
HLYARDDQSG TYDTFKELVL SRRGKSLSNA AKRFESSEQL SDAVSADPQA IGFIGLPYVR
QAKAVAIVDG QSQAMLPLAS LIATEDYPLS RRLFFYLPPD SNNPWARALV EFAQSRQGQA
IVAANGFIAQ TVQAIAVTPN ALMPEGYQSL SRHAQRLTVN FRFEEGSASL DNKARQDLAR
VFDYIKHHDK TDRAVTLVGF GDAKDDPARA DLLSKLRAMA VRRELVKNGV VLREVRGFGA
LMPVATNSGD EGRIKNRRVE VWVY