| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3644 |
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| Symbol | |
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| ID | 3715071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4121141 |
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| End bp | 4122610 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_349373 |
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| Protein GI | 77459866 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.44786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0343549 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGTA AAATCTTGCG CAGCAGCCTG ACACTGGTGC TGTCGGCGAT GATCCTCGCC
GGTTGCGCCA ACTACAGTGG CCTCGATACC CAGGGCGCCA GCCTCGATGC GAAAACCCTG
CAGACCGGGC AATCGCTCAA CGGCGTCATC CTGTCCCAGG CCGCGTGGCC GAAGAGCGAC
TGGTGGACCA GCCTCGGCGA TCCGCAGCTC GACGGTCTGA TCCGCGAAGC GCTGAAAGAC
AGCCCGGACA TGCAGATCGC CGACGCCCGC GCCCATCAGG CCAGCGCCGC CGCGTACGCC
GCCGATGCCG AGCGCTATCC GACCCTCGAC GCCAGCGCCG GCATCAGCCG TTCGCGTCTG
GCCCGGGATC AGGATCCGTT GGGGCAGGGT GGGGCTTACT CCACCGTGCG CAACATCAGC
GCCGGCTTCA ATTACAACTT CGACCTGTGG GGCGGTCAGC GTGACGCCTG GGAAGCCGCA
CTCGGTCAGG CCCGCGCCGC CGAGGTCGAC CGTCAGGCCG CACAGTTGAC CCTGGCTGCT
GACGTGGCCC GGGCCTACAG CGATCTGGGT CAGGCGCACA TCGTTTATGA CCTGGCCAAC
GAAGACCTCA AGCGCACCAA ACAGATGCTC GACCTGAGCC AGCGCCGCCT GAGTTCCGGG
ATCGACAGCC AGTATCAGTT CCAGCAGACC CAAAGTCTGG AAGCCAGCTC CGAAGCCAGC
CTGATCGACG CTGAAAAGCG CCTGAACAGC GCGAAAATCG CCCTGGCCGT ATTGCTCGGC
AAAGGCCCGG ATCGCGGTAA CGAAATCGCT CGGCCGAAAG TCCTGCAAGC CAGCGCTGTC
GCACTGCCAT CGGTGCTTCC CGCCGAACTG CTGGGCCGTC GTCCGGATCT GGTCGCCGCG
CGCTGGCGTG TCGAGGCGGC GAGCAAGGAC ATCGACTCGG CCAAGACCCG CTTCTATCCC
AACCTGAACC TGTCGGCTTC CGCTGGTGCC GAATCCTTGT TGGGGGACGC GATGTTCGGT
TCCGCCAGTC GCTTCTTCAA CATTGCCCCG ACGATTTCGG TGCCGATCTT CGATGGCGGA
CGCCTGCGCG CCAACCTCGA TGCCCGCGAC GCCGATTACG ACCTCGCCGT GGCGCAGTAC
AACAAAAGTC TGGTGAAAGC CCTGGGCGAT GTCAGCGACA CCATTAACCA GCTGCGTGAC
ATCGGCCGGC AGATCGGCGC CCAGCAGCAC GCAACCGAGA TTGCCCAGGA TTCTTACAAC
ACCGTCGTTC AGCGTTACGG TTCCGGCATC GGCAACTACC TGGACGTGCT CAGCATCGAG
CAGCAATTGC TGCAGGCCCA GCGTCAGCTG GCCAACCTGA ATGCCGAGCA GATCGACCTG
TCGATTCAAC TGATGCAAGC GCTGGGCGGC GGCTTCCAGG GGCAAACCCT GACCGCAGCC
AACGCCACCC CAGCCACGCC GCACAACTAA
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| Protein sequence | MSGKILRSSL TLVLSAMILA GCANYSGLDT QGASLDAKTL QTGQSLNGVI LSQAAWPKSD
WWTSLGDPQL DGLIREALKD SPDMQIADAR AHQASAAAYA ADAERYPTLD ASAGISRSRL
ARDQDPLGQG GAYSTVRNIS AGFNYNFDLW GGQRDAWEAA LGQARAAEVD RQAAQLTLAA
DVARAYSDLG QAHIVYDLAN EDLKRTKQML DLSQRRLSSG IDSQYQFQQT QSLEASSEAS
LIDAEKRLNS AKIALAVLLG KGPDRGNEIA RPKVLQASAV ALPSVLPAEL LGRRPDLVAA
RWRVEAASKD IDSAKTRFYP NLNLSASAGA ESLLGDAMFG SASRFFNIAP TISVPIFDGG
RLRANLDARD ADYDLAVAQY NKSLVKALGD VSDTINQLRD IGRQIGAQQH ATEIAQDSYN
TVVQRYGSGI GNYLDVLSIE QQLLQAQRQL ANLNAEQIDL SIQLMQALGG GFQGQTLTAA
NATPATPHN
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