| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3643 |
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| Symbol | |
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| ID | 3715070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | - |
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| Start bp | 4119923 |
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| End bp | 4121125 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | secretion protein HlyD |
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| Protein accession | YP_349372 |
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| Protein GI | 77459865 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.870857 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0330116 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACTG CCGAAAACAC ACAAGCTCAA GACAACGCCC AGGACACTGG CAATCCGCGC
AAACGCAAGG TGATGCTGCT GGTGCTGGCC GTTGTGGTTG CCCTCGCCGG TGTCGGCGTC
TGGGCGTATC ACGAATTCAT CGGGCGCTGG AGCGAAAGCA CCGACGACGC CTACGTCAAC
GGCAACGTGG TGGAAATCAC CCCGCTGGTG ACCGGCACCG TGGTCAGCAT CGGTGCTGAC
GATGGCGATC TGGTGCATGA AGGCCAGGTG CTGATCAACT TCGACCCGAA TGACGCCGAA
GTCGGCCTGC AAAGTGCCAA GGCCAATCTG GCCCGCACCG TGCGTCAGGT GCGCGGCCTG
TACAGCAACG TCGACGGCAT GAAGGCCCAG GTCAATGCGC AACAGGCCGA AGTGCAGAAA
GCCCAGGACA ACTTCAACCG CCGGAAAAAC CTCGCGGCCG GCGGGGCGAT TTCCCAGGAA
GAACTGTCCC ACGCCCGCGA TGACCTGACC TCGGCGCAGA ACGCCCTGGC CAACGCCAAA
CAGCAACTGA AAACCACCAG CGCGCTGGTC GATGACACCG TGGTGTCCTC GCACCCGGAC
GTGATGGCCG CCGCCGCGCA ACTGCGTCAG GCCTACCTGA CCAACGCTCG CAGCACCTTG
ATTGCGCCGG TCACCGGTTA TGTCGCCAAA CGCACCGTGC AACTTGGCCA GCGTGTGCAG
CCGGGCACCG CGCTGATGGC GGTGATTCCG CTGGATCAGC TGTGGATCGA CGCCAACTTC
AAGGAAACCC AGCTGCGTGA CATGCGCATT GGCCAACCGG TGGAGATCGA GTCGGACATC
TACGGCAGTG ACGTCAAGTT CAACGGCACC GTCGACAGCC TCGGCGCGGG CACCGGCAGC
GCGTTCGCCC TGTTGCCGGC GCAGAACGCC ACCGGTAACT GGATCAAGAT CGTGCAGCGT
GTGCCGGTAC GGATTCACGT CAACGCCGAA GAGCTGGCCA AACACCCGCT TCGCGTCGGC
CTGTCGACCA ATGTCGAGGT CAATCTGCAC GACCAGAGCG GCCCGGTACT GGCCCAGCAA
CCGCCGCAAA AGGCCTCGTT CAGCACCAAC GTCTACGATC GCCAACTGGC CGAAGCCGAC
GCGATGATCA CCCAGTTGAT CCACGACAAC AGCGCGGCGG TCAGCAAGAC TGCGCAACGC
TGA
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| Protein sequence | MATAENTQAQ DNAQDTGNPR KRKVMLLVLA VVVALAGVGV WAYHEFIGRW SESTDDAYVN
GNVVEITPLV TGTVVSIGAD DGDLVHEGQV LINFDPNDAE VGLQSAKANL ARTVRQVRGL
YSNVDGMKAQ VNAQQAEVQK AQDNFNRRKN LAAGGAISQE ELSHARDDLT SAQNALANAK
QQLKTTSALV DDTVVSSHPD VMAAAAQLRQ AYLTNARSTL IAPVTGYVAK RTVQLGQRVQ
PGTALMAVIP LDQLWIDANF KETQLRDMRI GQPVEIESDI YGSDVKFNGT VDSLGAGTGS
AFALLPAQNA TGNWIKIVQR VPVRIHVNAE ELAKHPLRVG LSTNVEVNLH DQSGPVLAQQ
PPQKASFSTN VYDRQLAEAD AMITQLIHDN SAAVSKTAQR
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