Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3642 |
Symbol | |
ID | 3715069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4118301 |
End bp | 4119830 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_349371 |
Protein GI | 77459864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.640209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.171171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAATA ACGCCTCTTT CACGCCGCCC AGCCTGTTGC TCAGCACCAT CGGCCTGTCG CTGGCGACCT TCATGCAGGT GCTCGACACC ACGATCGCCA ACGTGGCGCT GCCAACCATT TCCGGCAACC TCGGCGTGAG TTCGGAGCAG GGCACCTGGG TCATCACCTC GTTCGCCGTG AGCAACGCCA TTGCGCTGCC GCTCACCGGC TGGCTGAGCC GTCGCTTCGG CGAGGTGAAG CTGTTTCTGT GGGCGACCAT CCTGTTTGTG CTGGCTTCGT TCCTCTGCGG TATTTCCACA TCGATGCCGG AACTGATCGG CTTCCGCGTG CTGCAAGGCC TGGTGGCCGG GCCGTTGTAC CCGATGACCC AGACGCTGCT GATCGCGGTC TATCCACCGG CGAGGAGGGG CATGGCCCTG GCGTTGCTGG CGATGGTCAC GGTGGTGGCG CCGATTGCCG GGCCGATCCT CGGCGGCTGG ATCACCGACA GTTACAGCTG GCCGTGGATC TTCTTCATCA ACGTGCCGAT CGGGATTTTT GCGGTGATGG TGGTGCGCCA GCAGCTGGCC AAACGCCCGG TGGTCACCAG CCGTCAGCCG ATGGATTACG TCGGGCTGAT CACGCTGATC ATCGGCGTGG GTGCGTTGCA GGTGATCCTC GACAAGGGCA ATGACCTGGA CTGGTTCGAG TCAAACTTCA TCATCATCGG CGCGGCGATT TCGGTGATCG CGCTGGCGGT GTTCGTGATA TGGGAAATGA CCGACCAGCA TCCGGTAGTC AATTTGCGCC TGTTCGCCTA TCGCAACTTC CGCATCGGTA CGCTGGTGCT GGTATTGGGT TACGCCGGGT TCTTCGGCAT CAACCTGATC CTGCCGCAAT GGTTGCAGAC CCAGATGGGC TACACCGCGA CCTGGGCCGG ACTGGCGGTG GCACCGATCG GCATTCTGCC GGTGCTGCTG TCGCCGTTTG TCGGCAAGTA TGCGCACAAG TTCGACCTAC GTCTGTTGGC CGGTCTGGCG TTCCTGGCGA TCGGCCTGAG CTGCTTCATG CGTGCGGAGT TCACCAACGA GGTGGACTTC CAGCACATCG CTCTGGTGCA GTTGTTCATG GGGATTGGCG TGGCGCTGTT CTTCATGCCG ACCCTGAGCA TTCTGATGTC GGACTTGCCG CCGAACCAGA TTGCCGATGG TGCGGGTCTG GCGACGTTCC TGCGGACATT GGGTGGCAGT TTTGCGGCGT CGTTGACCAC GTGGATCTGG ATTCGCCGGG CGGATCAGCA TCATGCCTAC ATGAGCGAGA GTATCAGCAC CTTCGAACCA GCGACTCGCG AGACCTTGCA TTCGCTGGGT GGCGCGAGCC AATCGGCCTA TGCGCAGATG GATCAGATCC TCACCAGTCA GGCGTACATG CTCTCCACCG TGGATTACTT CACGCTGCTG GGCTGGGGGT TCATGGGGTT GATTCTGATT GTGTGGCTGG CCAAGCCGCC ATTCGCAGCC AAGGCAGGGC CGGCGGCTTC CGGGCACTAA
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Protein sequence | MSNNASFTPP SLLLSTIGLS LATFMQVLDT TIANVALPTI SGNLGVSSEQ GTWVITSFAV SNAIALPLTG WLSRRFGEVK LFLWATILFV LASFLCGIST SMPELIGFRV LQGLVAGPLY PMTQTLLIAV YPPARRGMAL ALLAMVTVVA PIAGPILGGW ITDSYSWPWI FFINVPIGIF AVMVVRQQLA KRPVVTSRQP MDYVGLITLI IGVGALQVIL DKGNDLDWFE SNFIIIGAAI SVIALAVFVI WEMTDQHPVV NLRLFAYRNF RIGTLVLVLG YAGFFGINLI LPQWLQTQMG YTATWAGLAV APIGILPVLL SPFVGKYAHK FDLRLLAGLA FLAIGLSCFM RAEFTNEVDF QHIALVQLFM GIGVALFFMP TLSILMSDLP PNQIADGAGL ATFLRTLGGS FAASLTTWIW IRRADQHHAY MSESISTFEP ATRETLHSLG GASQSAYAQM DQILTSQAYM LSTVDYFTLL GWGFMGLILI VWLAKPPFAA KAGPAASGH
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