| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3639 |
|---|
| Symbol | |
|---|
| ID | 3715066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4114878 |
|---|
| End bp | 4116578 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | YP_349368 |
|---|
| Protein GI | 77459861 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.193855 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC CCACTGTCGA CCCTACCTCG AATTCCAAGA CCGGCCCCGT TACGCCGGTC
AATTTCCTGC GCCCGATCAT CCAGGCGGAC CTGGACTCGG GTAAGCACAC GCAGATCGTC
ACCCGTTTCC CGCCAGAGCC CAACGGCTAC CTGCACATCG GCCACGCCAA GTCGATCTGT
GTGAACTTCG GCCTGGCCCA GGAGTTCGGC GGCGTCACTC ACCTGCGTTT CGACGACACC
AACCCGGCCA AGGAAGACCA GGAATACATC GACGCGATCG AAAGCGACGT CAAATGGCTG
GGCTTCGAAT GGTCCGGCGA AGTACGCTAC GCCTCGCAAT ACTTCGACCA GCTGCACGAC
TGGGCCGTCG AGCTGATCAA GGCCGGCAAG GCCTACGTCG ACGACCTGAC GCCTGAGCAA
GCCAAGGAAT ACCGCGGCAG CCTGACCGAG CCGGGCAAGA ACAGCCCGTT CCGCGACCGG
TCGGTGGAAG AGAACCTGGA CTGGTTCGCC CGCATGCGCG CCGGCGAGTT CCCGGACGGT
GCCCGCGTAC TGCGTGCCAA GATCGACATG GCCTCGCCGA ACATGAACCT GCGCGACCCG
ATCATGTACC GCATCCGCCA CGCTCATCAC CACCAGACCG GTGACAAGTG GTGCATCTAC
CCGAACTACG ACTTCACCCA CGGTCAGTCG GACGCCATCG AAGGCATCAC CCACTCGATC
TGCACCCTGG AGTTCGAAAG CCATCGTCCG CTGTACGAGT GGTTTCTCGA CGCACTGCCA
GTGCCGGCGC GTCCGCGTCA GTACGAGTTC AGCCGCCTGA ACCTCAACTA CACCATCACC
AGCAAGCGCA AGCTCAAGCA ACTGGTTGAC GAGAAACACG TCAACGGCTG GGACGATCCG
CGCATGTCGA CGCTGTCGGG CTTCCGCCGC CGTGGCTACA CCCCGGCATC GATCCGCAAC
TTCTGCGAGA TGATCGGCAC CAACCGTTCC GACGGCGTGG TCGACTTCGG CATGCTCGAG
TTCAGCATCC GTCAGGACCT GGACGCCAAC GCCCCGCGCG CCATGTGCGT GCTGCGTCCG
TTGAAAGTCG TGATCACCAA CTACCCGGAA GATCAGGTCG AGAACCTCGA ACTGCCGCGT
CATCCGCAGA AAGAAGAACT CGGCGTGCGC CAGCTGCCGT TCGCCCGTGA AATCTACATC
GACCGCGATG ACTTCATGGA AGAGCCGCCG AAGGGCTACA AGCGCCTGGA GCCGAACGGC
GAAGTGCGTC TGCGCGGCAG CTACGTGATC CGTGCCGACG AAGCGATCAA GGACGCCGAC
GGCAACATTG TCGAGCTGCG TTGCTCGTAC GATCCGGACA CCCTGGGCAA GAACCCTGAA
GGCCGCAAGG TCAAGGGCGT GATCCACTGG GTGCCGGCCG CTGCCAGCAT CGAGTGCGAA
GTGCGTCTGT ACGATCGCCT GTTCCGTTCT CCGAACCCGG AGAAGGCCGA AGACAGCGCG
AGTTTCCTGG ACAACATCAA CCCTGGCTCA CTGCAAGTGC TGACCGGTTG TCGTGCCGAG
CCTTCGCTGG GCAATGCACA GCCGGAAGAC CGTTTCCAGT TCGAGCGCGA AGGCTACTTC
GTCGCGGATA TCAAGGACTC GAAACCAGGT CAGCCGGTAT TCAACCGTAC CGTGACCCTG
CGCGATTCGT GGGGCCAGTG A
|
|---|
| Protein sequence | MSKPTVDPTS NSKTGPVTPV NFLRPIIQAD LDSGKHTQIV TRFPPEPNGY LHIGHAKSIC
VNFGLAQEFG GVTHLRFDDT NPAKEDQEYI DAIESDVKWL GFEWSGEVRY ASQYFDQLHD
WAVELIKAGK AYVDDLTPEQ AKEYRGSLTE PGKNSPFRDR SVEENLDWFA RMRAGEFPDG
ARVLRAKIDM ASPNMNLRDP IMYRIRHAHH HQTGDKWCIY PNYDFTHGQS DAIEGITHSI
CTLEFESHRP LYEWFLDALP VPARPRQYEF SRLNLNYTIT SKRKLKQLVD EKHVNGWDDP
RMSTLSGFRR RGYTPASIRN FCEMIGTNRS DGVVDFGMLE FSIRQDLDAN APRAMCVLRP
LKVVITNYPE DQVENLELPR HPQKEELGVR QLPFAREIYI DRDDFMEEPP KGYKRLEPNG
EVRLRGSYVI RADEAIKDAD GNIVELRCSY DPDTLGKNPE GRKVKGVIHW VPAAASIECE
VRLYDRLFRS PNPEKAEDSA SFLDNINPGS LQVLTGCRAE PSLGNAQPED RFQFEREGYF
VADIKDSKPG QPVFNRTVTL RDSWGQ
|
|---|
| |