| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3636 |
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| Symbol | |
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| ID | 3715063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 4110063 |
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| End bp | 4111913 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | sigma54 specific transcriptional regulator |
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| Protein accession | YP_349365 |
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| Protein GI | 77459858 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.521213 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCAC CTGCCCCGCC GCTTTCCCAC GATGCGATCG TCCAGGACTC CTGGTCCCGT
TGCCGCGCCT TCGGTCTCAA TCATCAAAGC GCCCCGGCCT TCGATCAGTT GCCCGCCGCC
GGCATTGCGC AGTTGCTCGA CCGCCATCAT TCGCTGGTGC AGACCACTCA CCAGGAAGTG
CTGCCGTATT ACGAGAACAT CCTGAGCAAT TCCAATTGCC TGATCATGCT GGCCGACAAT
CAGGGCCAGG TGCTGACGTC CTGGGGCACC CAGCGCTTTA TCGAGCCGAA TCTGGCGCGC
GGTTTTCAGG CCGGCGCCAG TTGGGTCGAA CGCGCCAGCG GCACCAACGC CATCGGCACG
GCGCTGGCCT GCGAGCAGGC GGTGCACATC GAACACGATG AACACTTTCT CAAGGCCAAC
CGCTTCATGA CCGGTTCCGC CGCGCCGATT TTCGATGCCG AGCGCAAGGT CATCGCCGTA
CTTGATGTGT CCAGCGACAG CTATCTGCCG CCCTCGCACA CCCTCGGCAT GGTCAAGATG
ATGAGTCAGA CCGTGGAAAA CCGGCTGATC CTCAACCTGT TCCATGGCCA GTACTTTCAA
CTGACCTTCA ACACCGGGTT GAACAACCTC GACAGCCAGT GGGCCGGGCT GCTGATCTTT
GATGAGAGCG GTCAGGTGTT GTCGGCCAAC CGACGAGCCG ACAATTTGCT GGGTGTGCGC
TTGTCGCGGG TCAGCGTTGA GAGCCTGTTC AAGGTGTCGT TGCTGGAGTT GATCAATCAG
CCGGATGGGT TGCCGTTTGC CTTGCAGACT TCCGGGCGCA ATCGTTTCCA GTGTTTGTTG
AAACGACCTA AACAAGCGCA GATTCAGGCG CGGGTCTTCA CTGAAGCCAG ACCCACCGAA
CCGAAAGTCG CCGTACCCAC GGCCATCAGC CTGAGCACGT TGCACTTCGG TGACAGCCGC
GTGGAAAAAG CCGTGCGCCA GGCCGAACGC TTGCTGGAAA AGGACATCCC GCTGCTGATT
CACGGGGAAA CCGGGGTCGG CAAGGAAGTC TTCGTCAAGG CCCTGCACCA GGCCAGCTCC
CGCAGCAAAC AGGCGTTCAT TGCCGTCAAC TGCGCGGCGA TCCCCGCCGA ACTGGTGGAG
TCCGAGCTGT TCGGTTACGA GAAAGGCGCG TTCACCGGCG CCAACCAAAA AGGCAGCATT
GGCCTGATCC GTAAGGCCGA CAAAGGCACG CTGTTCCTCG ATGAAATCGG CGACATGCCG
CTGCCGACTC AGGCTCGCTT GTTGCGCGTA TTGCAGGAGC GCTGCGTGCA ACCGGTGGGC
AGCAGCGAGC TGTTCCCGGT GGATCTGCGG ATCATCTCCG CCACCAATCG TTCGCTCCGG
GAACAGGTGC AACTGGGGCG CTTTCGCGAG GATTTGTACT ACCGCATCGG CGGTTTGACC
CTCGAATTGC CACCGCTTCG CGAGCGCAGC GACAAGCAGG CGCTGTTCAA ACGGCTGTGG
GAACAACATC GCGAGCCGTC GCAGTGGGCG GGATTGAGTC GTGAGGTGCT GGAGCTGTTC
GAGCGGCACC CGTGGCCGGG CAATCTGCGT CAGGTCAGCA GCGTGATGCA GGTGGCACTG
GCGATGGCCG AGGAACAACC GATTCGACCC GAGCATTTGC CGGACGACTT TTTTGTCGAT
CTGGAGATGG AGCCCGTGGA ATTGGCCGAG CCGTTGGGCA TCGACCTGAA CGATGCCGAG
GCGTTGAATC GGGAGTTGCA GCTGGCCGGG GGCAATATTT CCCACCTGGC GCGGCGGTTG
GGGGTGAGCC GCAATACGCT GTACAAGCGA TTGCGGCAGA TTGAAAGCTG A
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| Protein sequence | MAAPAPPLSH DAIVQDSWSR CRAFGLNHQS APAFDQLPAA GIAQLLDRHH SLVQTTHQEV
LPYYENILSN SNCLIMLADN QGQVLTSWGT QRFIEPNLAR GFQAGASWVE RASGTNAIGT
ALACEQAVHI EHDEHFLKAN RFMTGSAAPI FDAERKVIAV LDVSSDSYLP PSHTLGMVKM
MSQTVENRLI LNLFHGQYFQ LTFNTGLNNL DSQWAGLLIF DESGQVLSAN RRADNLLGVR
LSRVSVESLF KVSLLELINQ PDGLPFALQT SGRNRFQCLL KRPKQAQIQA RVFTEARPTE
PKVAVPTAIS LSTLHFGDSR VEKAVRQAER LLEKDIPLLI HGETGVGKEV FVKALHQASS
RSKQAFIAVN CAAIPAELVE SELFGYEKGA FTGANQKGSI GLIRKADKGT LFLDEIGDMP
LPTQARLLRV LQERCVQPVG SSELFPVDLR IISATNRSLR EQVQLGRFRE DLYYRIGGLT
LELPPLRERS DKQALFKRLW EQHREPSQWA GLSREVLELF ERHPWPGNLR QVSSVMQVAL
AMAEEQPIRP EHLPDDFFVD LEMEPVELAE PLGIDLNDAE ALNRELQLAG GNISHLARRL
GVSRNTLYKR LRQIES
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