Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3625 |
Symbol | |
ID | 3715052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4098761 |
End bp | 4100170 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | heavy metal sensor Signal transduction histidine Kinases (STHK) |
Protein accession | YP_349354 |
Protein GI | 77459847 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCGG CCAGCCTGTC GCTACGGCTG GGTCTGACGG TCAGCATTCT GGGCGCATTG CTGGTGGTGT TCCTGGCGAT CCTCGCGTAT TTCGCCCTGA CCCACGAGCT GAACGCGCTA TCCCGGGACA GCCTGGAAAA GAAGCTGGAA CAGGTCGAGC ACAGCCTGAC GCTGTACTTC GACACCGGAG AGATCAGTGC CAAGCCGCAC ATTCTGCTCG ATCAGGTCAT GGGGCACGAC AACCTGACCC TGACTATTTA TGACCTGAAC AACCTACGCA CCCCGCTGCT CAAATCCGGT TCGGGCCTGA CTGATCCACG GGTCGAGTTG AAGGCGGTAC GGGCGACGAC CGATCAGTTG ACCCACACCG ACAGCGCAGA TGCCGAAGGT GCGAAGTTTC TCACCGTCTC CAAGCTGATT CGCCTCAAGG ACGGCAGCAG CGTACCAGTC CTGCTGTCGA TGGATAACGC CCACGATCAG GCCTTGCTCA GTGCTTATTT GCGCTCGACG TTGATGGCTT TGCCGTTGCT GCTGGTATTC ATCGGCCTGA CCGCTTGGGG CGCCGTGCAG CGAGGGTTGG CACCGTTGCG GGAATTTCGC AAAGTGGCAG CGCGAGTGAC GACGCAGGAT CTCGATCATC GCCTGTCGGT GCTGAACATG CCCCAGGAAC TCAGCGAACT GGCGCAGGGC ATCAACGTGA TGCTCGATCG CCTGGACAGC GGCGTGCAGC AGTTGTCGCA ATTCTCCGAT GACCTGGCCC ACGAGCTGCG CACGCCGATC AACAACCTGA TGGGCAAGGC TCAGGTGACG CTGTCGCGCG AGCGCTCGGT CGAGGAATAC ACCAACGTTC TGGTGTCCTG CACCGAAGAG CTGGAGCGGG TCGCGCGGAT TGTCTCGGAC ATGCTGTTCC TGGCCCAGGC CAGCCAGCCT GCGGCGCACG CCTCGTTCGA GCCGATTGCA CTGGAAGAAG AGGCGTCCAG GGTGGCGGAT CTGTTTTCCC TGACGGCACA GGACAAACAG ATCGATCTGA AGATCATCGG CAGCGCGCAG GTGTCGGGGG ACCGGCTGAT GATTCAACGA GCGATTTCCA ATCTGCTGTC CAATGCCCTG CGCCACTGCC CGTCCGGCAA GACCGTTTCG CTGTTCATCG AACGTGCGCC GAACGAGGTG TCGCTGCGGG TGAGCAATCC AGGCGCAGGC ATCGAAGCGC AGCACCTGCC GTATCTGTTC GACCGTTTTT ACCGGGTCGA CAGCAGCCGC ACCCGGTCAC AGGGCAGTAC CGGTCTGGGA CTGGCCATCG TGCACTCGAT CATGACCCTG CATCAGGGCT CTGCGCAGGT TCAAAGCCGA CCGGGAGCGA TGACAATATT CAGCCTGGTG TTTCCCGTGA CGCACCCGGA ACGGCACTGA
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Protein sequence | MKPASLSLRL GLTVSILGAL LVVFLAILAY FALTHELNAL SRDSLEKKLE QVEHSLTLYF DTGEISAKPH ILLDQVMGHD NLTLTIYDLN NLRTPLLKSG SGLTDPRVEL KAVRATTDQL THTDSADAEG AKFLTVSKLI RLKDGSSVPV LLSMDNAHDQ ALLSAYLRST LMALPLLLVF IGLTAWGAVQ RGLAPLREFR KVAARVTTQD LDHRLSVLNM PQELSELAQG INVMLDRLDS GVQQLSQFSD DLAHELRTPI NNLMGKAQVT LSRERSVEEY TNVLVSCTEE LERVARIVSD MLFLAQASQP AAHASFEPIA LEEEASRVAD LFSLTAQDKQ IDLKIIGSAQ VSGDRLMIQR AISNLLSNAL RHCPSGKTVS LFIERAPNEV SLRVSNPGAG IEAQHLPYLF DRFYRVDSSR TRSQGSTGLG LAIVHSIMTL HQGSAQVQSR PGAMTIFSLV FPVTHPERH
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