Gene Pfl01_3625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3625 
Symbol 
ID3715052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4098761 
End bp4100170 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content61% 
IMG OID 
Productheavy metal sensor Signal transduction histidine Kinases (STHK) 
Protein accessionYP_349354 
Protein GI77459847 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCGG CCAGCCTGTC GCTACGGCTG GGTCTGACGG TCAGCATTCT GGGCGCATTG 
CTGGTGGTGT TCCTGGCGAT CCTCGCGTAT TTCGCCCTGA CCCACGAGCT GAACGCGCTA
TCCCGGGACA GCCTGGAAAA GAAGCTGGAA CAGGTCGAGC ACAGCCTGAC GCTGTACTTC
GACACCGGAG AGATCAGTGC CAAGCCGCAC ATTCTGCTCG ATCAGGTCAT GGGGCACGAC
AACCTGACCC TGACTATTTA TGACCTGAAC AACCTACGCA CCCCGCTGCT CAAATCCGGT
TCGGGCCTGA CTGATCCACG GGTCGAGTTG AAGGCGGTAC GGGCGACGAC CGATCAGTTG
ACCCACACCG ACAGCGCAGA TGCCGAAGGT GCGAAGTTTC TCACCGTCTC CAAGCTGATT
CGCCTCAAGG ACGGCAGCAG CGTACCAGTC CTGCTGTCGA TGGATAACGC CCACGATCAG
GCCTTGCTCA GTGCTTATTT GCGCTCGACG TTGATGGCTT TGCCGTTGCT GCTGGTATTC
ATCGGCCTGA CCGCTTGGGG CGCCGTGCAG CGAGGGTTGG CACCGTTGCG GGAATTTCGC
AAAGTGGCAG CGCGAGTGAC GACGCAGGAT CTCGATCATC GCCTGTCGGT GCTGAACATG
CCCCAGGAAC TCAGCGAACT GGCGCAGGGC ATCAACGTGA TGCTCGATCG CCTGGACAGC
GGCGTGCAGC AGTTGTCGCA ATTCTCCGAT GACCTGGCCC ACGAGCTGCG CACGCCGATC
AACAACCTGA TGGGCAAGGC TCAGGTGACG CTGTCGCGCG AGCGCTCGGT CGAGGAATAC
ACCAACGTTC TGGTGTCCTG CACCGAAGAG CTGGAGCGGG TCGCGCGGAT TGTCTCGGAC
ATGCTGTTCC TGGCCCAGGC CAGCCAGCCT GCGGCGCACG CCTCGTTCGA GCCGATTGCA
CTGGAAGAAG AGGCGTCCAG GGTGGCGGAT CTGTTTTCCC TGACGGCACA GGACAAACAG
ATCGATCTGA AGATCATCGG CAGCGCGCAG GTGTCGGGGG ACCGGCTGAT GATTCAACGA
GCGATTTCCA ATCTGCTGTC CAATGCCCTG CGCCACTGCC CGTCCGGCAA GACCGTTTCG
CTGTTCATCG AACGTGCGCC GAACGAGGTG TCGCTGCGGG TGAGCAATCC AGGCGCAGGC
ATCGAAGCGC AGCACCTGCC GTATCTGTTC GACCGTTTTT ACCGGGTCGA CAGCAGCCGC
ACCCGGTCAC AGGGCAGTAC CGGTCTGGGA CTGGCCATCG TGCACTCGAT CATGACCCTG
CATCAGGGCT CTGCGCAGGT TCAAAGCCGA CCGGGAGCGA TGACAATATT CAGCCTGGTG
TTTCCCGTGA CGCACCCGGA ACGGCACTGA
 
Protein sequence
MKPASLSLRL GLTVSILGAL LVVFLAILAY FALTHELNAL SRDSLEKKLE QVEHSLTLYF 
DTGEISAKPH ILLDQVMGHD NLTLTIYDLN NLRTPLLKSG SGLTDPRVEL KAVRATTDQL
THTDSADAEG AKFLTVSKLI RLKDGSSVPV LLSMDNAHDQ ALLSAYLRST LMALPLLLVF
IGLTAWGAVQ RGLAPLREFR KVAARVTTQD LDHRLSVLNM PQELSELAQG INVMLDRLDS
GVQQLSQFSD DLAHELRTPI NNLMGKAQVT LSRERSVEEY TNVLVSCTEE LERVARIVSD
MLFLAQASQP AAHASFEPIA LEEEASRVAD LFSLTAQDKQ IDLKIIGSAQ VSGDRLMIQR
AISNLLSNAL RHCPSGKTVS LFIERAPNEV SLRVSNPGAG IEAQHLPYLF DRFYRVDSSR
TRSQGSTGLG LAIVHSIMTL HQGSAQVQSR PGAMTIFSLV FPVTHPERH