Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3613 |
Symbol | |
ID | 3715001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4083006 |
End bp | 4084859 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | NADH dehydrogenase subunit L |
Protein accession | YP_349342 |
Protein GI | 77459835 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.703817 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTAC TCTTTCTGAC TTTCGTATTC CCTCTGATCG GGTTCCTGTT GCTGTCGTTC TCGCGCGGCC GCTTCTCGGA AAACCTGTCG GCGCTGATCG GTGTCGGCTC CATCGGCCTG TCTGCCATCG TCGCGGCCTA CGTGATCTGG CAGTTCAACG TCGCGCCACC GGAAGGCGGC GTCTACACCC AGGTGCTGTG GCGCTGGATG TCGGTGGAAG GTTTCCAGCC TAACTTCGCG CTGTACCTGG ATGGTCTGTC CGTGACCATG CTCGGTGTGG TCGTCGGTGT CGGCTTCCTG ATCCACCTGT TTGCATCGTG GTACATGCGT GGCGAAGCCG GTTACTCGCG CTTCTTCTCG TACACCAACC TGTTTATCGC CAGCATGCTG TTCCTGATCC TGGGCGATAA CCTGCTGTTC ATCTACTTCG GTTGGGAAGG CGTGGGCCTG TGCTCGTACC TGTTGATCGG TTTCTACTAC AGCAACCGCA ACAACGGTAA CGCCGCACTG AAAGCCTTCA TCGTCACCCG TATCGGCGAC GTGTTCATGG CAATCGGCCT GTTCATCCTG TTCCAGCAAC TGGGCACGCT GAACGTCCAG GAACTGCTGG TGAAGGCGCC TGAGCACTTC AAGGTCGGCG ATTTCTGGAT CGTGCTTGCT ACCCTGATGC TGTTGGGTGG TGCGGTCGGT AAATCGGCGC AACTGCCGCT GCAAACCTGG CTGGCAGACG CGATGGCCGG CCCTACCCCG GTTTCGGCAC TGATCCATGC CGCAACCATG GTGACCGCCG GTGTCTACCT GATCGCCCGT ACCCACGGCC TGTTCGCCCT GGCGCCGGAC ATCCTGCACC TGGTCGGCAT CGTCGGTGGT GTGACCCTGG TGCTGGCCGG TTTCGCCGCA CTGGTGCAAA CCGACATCAA ACGTATCCTC GCCTACTCGA CCATGAGCCA GATCGGCTAC ATGTTCCTGG CGCTGGGCGT TGGCGCCTGG GAAGGCGCGA TCTTCCACCT GATGACCCAC GCCTTCTTCA AGGCCCTGCT GTTCCTTGCT TCCGGTGCGG TGATCGTTGC CTGCCACCAC GAGCAGAACA TCTTCAAGAT GGGCGGCCTG TGGAAGAAAC TGCCGCTGGC CTACGCCAGC TTCATCGTCG GTGGTGCCGC TCTGGCTGCC CTGCCACTGT TGACCGCAGG TTTCTACTCC AAGGACGAAA TCCTCTGGGA AGCGTTCGCC AGCGGCAACC ACGGTCTGCT TTACGCAGGT CTGGTCGGCG CATTCATGAC GTCGCTGTAC ACCTTCCGCC TGATCTTCAT CGCGTTCCAC GGTGAAGCCA AGACCGAAGC CCACGCCGGT CACGGCATCG CTCACTGGCT GCCGCTGTCG GTGCTGATCG TGCTGTCGAC TTTCGTCGGC GCCATGATCG TTCCACCGCT GCACGGCGTA CTGCCTGAGA GCGTTGGCCA TGCCGGTGGC GAAGCCAAGC ACAGTCTGGA AATCGCTTCG GGCGCCATCG CCCTGGCCGG TATCCTGCTG GCGGCCCTGC TGTTCCTCGG CAAGCGTCGC TTCGTGACCG CGATCGCCAA CAGCGGCATC GGCCGTCTCC TTTCGGCCTG GTGGTTCGCT GCCTGGGGCT TCGACTGGAT CTACGACAAA CTGTTCGTCA AGCCGTACCT TGCGATCAGC CACATGCTGC GCAAAGACCC GCTCGACCAG ACCATCGGTC TGATCCCGCG CATGGCCAAG GGGGGTCACA CCGCCCTGAG CCGTACCGAA ACCGGTCAAC TGCGTTGGTA CGCTGCTTCG ATGGCTGCTG GTGCCGTGTT GGTCATCGGC GCTGTCGTGC TGGTAGCGGT CTGA
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Protein sequence | MNLLFLTFVF PLIGFLLLSF SRGRFSENLS ALIGVGSIGL SAIVAAYVIW QFNVAPPEGG VYTQVLWRWM SVEGFQPNFA LYLDGLSVTM LGVVVGVGFL IHLFASWYMR GEAGYSRFFS YTNLFIASML FLILGDNLLF IYFGWEGVGL CSYLLIGFYY SNRNNGNAAL KAFIVTRIGD VFMAIGLFIL FQQLGTLNVQ ELLVKAPEHF KVGDFWIVLA TLMLLGGAVG KSAQLPLQTW LADAMAGPTP VSALIHAATM VTAGVYLIAR THGLFALAPD ILHLVGIVGG VTLVLAGFAA LVQTDIKRIL AYSTMSQIGY MFLALGVGAW EGAIFHLMTH AFFKALLFLA SGAVIVACHH EQNIFKMGGL WKKLPLAYAS FIVGGAALAA LPLLTAGFYS KDEILWEAFA SGNHGLLYAG LVGAFMTSLY TFRLIFIAFH GEAKTEAHAG HGIAHWLPLS VLIVLSTFVG AMIVPPLHGV LPESVGHAGG EAKHSLEIAS GAIALAGILL AALLFLGKRR FVTAIANSGI GRLLSAWWFA AWGFDWIYDK LFVKPYLAIS HMLRKDPLDQ TIGLIPRMAK GGHTALSRTE TGQLRWYAAS MAAGAVLVIG AVVLVAV
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