Gene Pfl01_3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3613 
Symbol 
ID3715001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4083006 
End bp4084859 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content61% 
IMG OID 
ProductNADH dehydrogenase subunit L 
Protein accessionYP_349342 
Protein GI77459835 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.703817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTAC TCTTTCTGAC TTTCGTATTC CCTCTGATCG GGTTCCTGTT GCTGTCGTTC 
TCGCGCGGCC GCTTCTCGGA AAACCTGTCG GCGCTGATCG GTGTCGGCTC CATCGGCCTG
TCTGCCATCG TCGCGGCCTA CGTGATCTGG CAGTTCAACG TCGCGCCACC GGAAGGCGGC
GTCTACACCC AGGTGCTGTG GCGCTGGATG TCGGTGGAAG GTTTCCAGCC TAACTTCGCG
CTGTACCTGG ATGGTCTGTC CGTGACCATG CTCGGTGTGG TCGTCGGTGT CGGCTTCCTG
ATCCACCTGT TTGCATCGTG GTACATGCGT GGCGAAGCCG GTTACTCGCG CTTCTTCTCG
TACACCAACC TGTTTATCGC CAGCATGCTG TTCCTGATCC TGGGCGATAA CCTGCTGTTC
ATCTACTTCG GTTGGGAAGG CGTGGGCCTG TGCTCGTACC TGTTGATCGG TTTCTACTAC
AGCAACCGCA ACAACGGTAA CGCCGCACTG AAAGCCTTCA TCGTCACCCG TATCGGCGAC
GTGTTCATGG CAATCGGCCT GTTCATCCTG TTCCAGCAAC TGGGCACGCT GAACGTCCAG
GAACTGCTGG TGAAGGCGCC TGAGCACTTC AAGGTCGGCG ATTTCTGGAT CGTGCTTGCT
ACCCTGATGC TGTTGGGTGG TGCGGTCGGT AAATCGGCGC AACTGCCGCT GCAAACCTGG
CTGGCAGACG CGATGGCCGG CCCTACCCCG GTTTCGGCAC TGATCCATGC CGCAACCATG
GTGACCGCCG GTGTCTACCT GATCGCCCGT ACCCACGGCC TGTTCGCCCT GGCGCCGGAC
ATCCTGCACC TGGTCGGCAT CGTCGGTGGT GTGACCCTGG TGCTGGCCGG TTTCGCCGCA
CTGGTGCAAA CCGACATCAA ACGTATCCTC GCCTACTCGA CCATGAGCCA GATCGGCTAC
ATGTTCCTGG CGCTGGGCGT TGGCGCCTGG GAAGGCGCGA TCTTCCACCT GATGACCCAC
GCCTTCTTCA AGGCCCTGCT GTTCCTTGCT TCCGGTGCGG TGATCGTTGC CTGCCACCAC
GAGCAGAACA TCTTCAAGAT GGGCGGCCTG TGGAAGAAAC TGCCGCTGGC CTACGCCAGC
TTCATCGTCG GTGGTGCCGC TCTGGCTGCC CTGCCACTGT TGACCGCAGG TTTCTACTCC
AAGGACGAAA TCCTCTGGGA AGCGTTCGCC AGCGGCAACC ACGGTCTGCT TTACGCAGGT
CTGGTCGGCG CATTCATGAC GTCGCTGTAC ACCTTCCGCC TGATCTTCAT CGCGTTCCAC
GGTGAAGCCA AGACCGAAGC CCACGCCGGT CACGGCATCG CTCACTGGCT GCCGCTGTCG
GTGCTGATCG TGCTGTCGAC TTTCGTCGGC GCCATGATCG TTCCACCGCT GCACGGCGTA
CTGCCTGAGA GCGTTGGCCA TGCCGGTGGC GAAGCCAAGC ACAGTCTGGA AATCGCTTCG
GGCGCCATCG CCCTGGCCGG TATCCTGCTG GCGGCCCTGC TGTTCCTCGG CAAGCGTCGC
TTCGTGACCG CGATCGCCAA CAGCGGCATC GGCCGTCTCC TTTCGGCCTG GTGGTTCGCT
GCCTGGGGCT TCGACTGGAT CTACGACAAA CTGTTCGTCA AGCCGTACCT TGCGATCAGC
CACATGCTGC GCAAAGACCC GCTCGACCAG ACCATCGGTC TGATCCCGCG CATGGCCAAG
GGGGGTCACA CCGCCCTGAG CCGTACCGAA ACCGGTCAAC TGCGTTGGTA CGCTGCTTCG
ATGGCTGCTG GTGCCGTGTT GGTCATCGGC GCTGTCGTGC TGGTAGCGGT CTGA
 
Protein sequence
MNLLFLTFVF PLIGFLLLSF SRGRFSENLS ALIGVGSIGL SAIVAAYVIW QFNVAPPEGG 
VYTQVLWRWM SVEGFQPNFA LYLDGLSVTM LGVVVGVGFL IHLFASWYMR GEAGYSRFFS
YTNLFIASML FLILGDNLLF IYFGWEGVGL CSYLLIGFYY SNRNNGNAAL KAFIVTRIGD
VFMAIGLFIL FQQLGTLNVQ ELLVKAPEHF KVGDFWIVLA TLMLLGGAVG KSAQLPLQTW
LADAMAGPTP VSALIHAATM VTAGVYLIAR THGLFALAPD ILHLVGIVGG VTLVLAGFAA
LVQTDIKRIL AYSTMSQIGY MFLALGVGAW EGAIFHLMTH AFFKALLFLA SGAVIVACHH
EQNIFKMGGL WKKLPLAYAS FIVGGAALAA LPLLTAGFYS KDEILWEAFA SGNHGLLYAG
LVGAFMTSLY TFRLIFIAFH GEAKTEAHAG HGIAHWLPLS VLIVLSTFVG AMIVPPLHGV
LPESVGHAGG EAKHSLEIAS GAIALAGILL AALLFLGKRR FVTAIANSGI GRLLSAWWFA
AWGFDWIYDK LFVKPYLAIS HMLRKDPLDQ TIGLIPRMAK GGHTALSRTE TGQLRWYAAS
MAAGAVLVIG AVVLVAV