Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3608 |
Symbol | |
ID | 3714996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4077909 |
End bp | 4080623 |
Gene Length | 2715 bp |
Protein Length | 904 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | NADH dehydrogenase subunit G |
Protein accession | YP_349337 |
Protein GI | 77459830 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0967194 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACTA TCCACGTAGA CGGCAAAGCG CTCGAAGTCG ACGGGGCAGA CAACCTGTTA CAGGCATGTC TGTCGCTGGG CCTCGACATC CCTTATTTCT GCTGGCACCC CGCGCTTGGT AGCGTCGGGG CCTGCCGCCA GTGCGCGGTC AAGCAGTACA CCGACGAAAA CGACACCCGT GGTCGCATCG TCATGTCCTG CATGACCCCG GCCACCGACA ATACCTGGAT CTCCATCGAC GATGAAGAAT CCAAGGCATT CCGCGCCAGT GTCGTCGAAT GGCTGATGAC CAACCACCCG CACGACTGCC CTGTGTGCGA GGAAGGCGGT CACTGCCACC TGCAAGACAT GACCGTGATG ACCGGCCACA ACGAGCGCCG TTATCGCTTC ACCAAACGCA CCCACCAGAA CCAGCAACTG GGCCCGTTCA TTTCCCACGA AATGAACCGC TGCATCGCCT GCTACCGCTG CGTGCGTTTC TACAAGGACT ACGCCGGCGG CACCGACCTC GGTGTATTCG GCGCCCACGA CAACGTGTAC TTCGGTCGCG TTGAAGACGG CACCCTCGAA AGCGAGTTCT CCGGCAACCT CACCGAGGTC TGCCCGACCG GTGTGTTCAC CGACAAGACT CACTCCGAGC GCTACAACCG TAAGTGGGAC ATGCAGTTCT CGCCGAGCAT CTGCCATGGC TGCTCGAGCG GTTGCAACAT TTCCCCGGGC GAGCGTTACG GCGAACTGCG TCGCATCGAA AACCGTTACA ACGGTTCGGT GAACCAGTAC TTCCTGTGCG ACCGTGGCCG TTTCGGTTAT GGCTACGTCA ACCGCACCGA CCGTCCACGT CAGCCGCTGC TGGCCGACGG CACCAAGCTT GGACTGGATG CTGCGCTGGA CAAAGCCGCC GACCTGCTGC GCGGTCGCAA CATCGTCGGT ATCGGTTCGC CACGTGCCAG CCTGGAAAGC AACTACGCGT TGCGTGAACT GGTGGGCGCC GAGCACTTCT ACTCCGGTAT CGAAGCCTCC GAACTGGAAC GCATCCGTCT GGTCCTGCAA GTGCTGAAAG ACAGCCCGCT GCCAGTGCCG AACATGCGCG ACATCGAAGA CCACGACGCT GTGTTCGTCC TCGGTGAAGA CCTGACCCAG ACCGCCGCCC GCATGGCCCT GGCCCTGCGT CAGTCGGTCA AAGGCAAGGC CGAAGACATG GCCGAAGCCA TGCGCGTTCA GCCTTGGCTC GACGCTGCGG TGAAGAACAT CGGTCAGCAC GAACTGAACC CGCTGTTCAT CGCCAGCCTG GCTGAAACCA AGCTCGATGA CATCGCCGAA GAATGCGTAC ACGCCGCTCC CGACGATCTG GCGCGCATCG GTTTCGCCGT GGCTCACGCC CTGGACGCCA GCGCGCCGGC CGTTGAAGGT CTGGACGCCG AAGCCCTGGA ACTGGCCAAG CGCATCGCCG ATGCTCTGCT CGCGGCCAAG CGTCCGCTGA TCATCGCCGG TACTTCGCTG GGCTCCAAAG CCTTGATCGA AGCCGCTGCG AACATCGCCA AGGCCCTGAA GCTGCGCGAG AAGAACGGTT CGATCAGCCT GATCGTGCCG GAAGCCAACA GCCTCGGCCT GGCCATGCTC GGTGGCGAAT CGGTCGATGC CGCGCTGCAA GCGGTCATCG ACGGCAAGGC CGACGCCATC GTCGTGCTGG AAAACGATCT GTACACCCGT ACCGCCAAGG CCAAGGTCGA TGCGGCACTG AACGCTGCGA AAGTGGTGAT CGTTGCCGAC CATCAAAAGA CCGCCACCAG CGACCGCGCG CATCTGGTTC TGCCGGCCGC CAGCTTCGCT GAAGGCGACG GTACACTGGT CAGCCAGGAA GGTCGTGCCC AGCGCTTCTT CCAGGTTTTC GACCCGCAAT ACATGGACGC GAGCATTCTG GTCCACGAAG GCTGGCGCTG GCTGCACGCC CTGCGCGCCA CCCTGCTGAA CCAGCCGATC GACTGGACGC AACTCGACCA CGTGACCGCT GCCGTTGCGT CGAGCACGCC GCAACTGGCC CGTATTGTCG ACGCAGCACC GTCCGCCTCG TTCCGCATCA AGGGTCTGAA ACTGGCCCGT GAGCCGCTGC GTTACTCCGG TCGCACCGCG ATGCGCGCCG ACATCAGCGT TCACGAACCA CGCACCCCGC AAGACAAAGA CACCGCGTTC GCCTTCTCGA TGGAAGGTTA CTCGGGCTCC GCCGAACCGC GTCAGCAAGT GCCGTTCGCC TGGTCGCCGG GCTGGAACTC GCCGCAAGCC TGGAACAAGT TCCAGGACGA AGTCGGTGGT CACCTGCGCG CTGGCGATCC GGGCACCCGC CTGATCGAAA GCACCGGTGA TTCGCTGAAC TGGTTCGCCA GTGTTCCGCG CGCGTTCAAC CCGGCCCAGG GCACCTGGCA AGCCGTGCCG TTCTACCACC TGTTCGGCAG CGACGAGAAC TCGTCGAAAG CCGCTCCGGT CCAGGAACGC ATCCCGGCCG CCTACGTTGC ACTGGCCAAG TCCGAAGCGG ATCGCCTGGG CGTGAACGAC GGCGCACTGC TGAGCCTCAA TGTTGCCGGC CAGACCCTGC GTCTGCCGCT GCGCATCAAT GAAGAACTGG GCGCAGGTCT GGTGGCATTG CCTGCAGGCA TCGCCGGCAT TCCACCGGCA TTCGCTGGCG TATCCGTTGA TGGTCTGCAG GAGGCAGCGC AATGA
|
Protein sequence | MATIHVDGKA LEVDGADNLL QACLSLGLDI PYFCWHPALG SVGACRQCAV KQYTDENDTR GRIVMSCMTP ATDNTWISID DEESKAFRAS VVEWLMTNHP HDCPVCEEGG HCHLQDMTVM TGHNERRYRF TKRTHQNQQL GPFISHEMNR CIACYRCVRF YKDYAGGTDL GVFGAHDNVY FGRVEDGTLE SEFSGNLTEV CPTGVFTDKT HSERYNRKWD MQFSPSICHG CSSGCNISPG ERYGELRRIE NRYNGSVNQY FLCDRGRFGY GYVNRTDRPR QPLLADGTKL GLDAALDKAA DLLRGRNIVG IGSPRASLES NYALRELVGA EHFYSGIEAS ELERIRLVLQ VLKDSPLPVP NMRDIEDHDA VFVLGEDLTQ TAARMALALR QSVKGKAEDM AEAMRVQPWL DAAVKNIGQH ELNPLFIASL AETKLDDIAE ECVHAAPDDL ARIGFAVAHA LDASAPAVEG LDAEALELAK RIADALLAAK RPLIIAGTSL GSKALIEAAA NIAKALKLRE KNGSISLIVP EANSLGLAML GGESVDAALQ AVIDGKADAI VVLENDLYTR TAKAKVDAAL NAAKVVIVAD HQKTATSDRA HLVLPAASFA EGDGTLVSQE GRAQRFFQVF DPQYMDASIL VHEGWRWLHA LRATLLNQPI DWTQLDHVTA AVASSTPQLA RIVDAAPSAS FRIKGLKLAR EPLRYSGRTA MRADISVHEP RTPQDKDTAF AFSMEGYSGS AEPRQQVPFA WSPGWNSPQA WNKFQDEVGG HLRAGDPGTR LIESTGDSLN WFASVPRAFN PAQGTWQAVP FYHLFGSDEN SSKAAPVQER IPAAYVALAK SEADRLGVND GALLSLNVAG QTLRLPLRIN EELGAGLVAL PAGIAGIPPA FAGVSVDGLQ EAAQ
|
| |