| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3598 |
|---|
| Symbol | |
|---|
| ID | 3714986 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4066638 |
|---|
| End bp | 4068053 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | adenylosuccinate lyase |
|---|
| Protein accession | YP_349327 |
|---|
| Protein GI | 77459820 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATACGCG CCCCATTTCG TTGCCCGACT GTCCGAGAAC ACCCCATGCA GCTCTCTTCG
CTCACTGCGG TTTCCCCTGT TGACGGCCGC TACGCCGGCA AAACCCAGGC CCTGCGCCCA
ATTTTCAGCG AGTACGGTCT GATCCGTGCC CGCGTTCTGG TTGAAGTGCG CTGGCTCCAG
CGCCTGGCCG CTCACGCCGG CATCCCGGAA GTGCCAGCCT TCTCCGCCGA AGCCAACGCC
GTTCTGAATG AACTGGCCGA GAACTTCTCG CTAGAGCACG CCGAGCGCGT GAAAGAGATC
GAGCGAACCA CCAACCACGA CGTAAAAGCG ATCGAATACC TGCTCAAAGA GCAGGCAGCC
AAGCTGCCGG AGCTGGCCAA GGTCAGCGAA TTCATCCACT TCGCCTGCAC CAGCGAGGAC
ATCAACAACC TGTCCCACGC CCTGATGCTG CGCGAAGGCC GTGACGACGT GATGCTGCCG
CTGATGCGCC AGACCGCCAA CGCCATCCGC GAACTGGCCA TCCGCTTCGC AGACGTACCG
ATGCTGTCGC GCACCCACGG TCAGCCGGCT TCGCCGACCA CCCTGGGTAA AGAGCTGGCG
AACGTGGTTT ACCGTCTCGA GCGTCAGATC GCTCAGGTCG CTGCCGTTCC GCTGCTGGGC
AAGATCAACG GCGCTGTCGG CAACTACAAC GCTCACCTGT CCGCCTACCC GCAGATCGAC
TGGGAAGCCA ACGCCCGCGC CTTCATCGAA GACGAGCTGG GTCTGGGCTT CAACCCGTAC
ACCACGCAGA TCGAGCCGCA CGACTACATC GCCGAGCTGT TCGACGCCAT TGCGCGCTTC
AACACCATCC TGATCGACTT TGACCGTGAC ATCTGGGGCT ACATCTCCCT GGGTTACTTC
AAGCAGCGCA CCATCGCCGG CGAAATCGGT TCGTCGACCA TGCCGCACAA GGTCAACCCG
ATCGACTTCG AAAACTCCGA AGGCAACCTG GGCATCGCCA ACGCGCTGTT CCAGCACCTG
GCGAGCAAAC TGCCGATCTC CCGCTGGCAG CGCGATCTGA CTGACTCCAC CGTTCTGCGC
AACCTCGGTG TGGGTTTCGC CCACAGTGTG ATCGCGTACG AAGCGAGCCT CAAAGGCATC
AGCAAGCTCG AACTGAACGC TGACAAGATC GCTGCCGATC TGGACGCTTG CTGGGAAGTC
CTGGCCGAGC CGATCCAGAC CGTGATGCGC CGCTACAACA TCGAAAACCC GTACGAGAAG
CTGAAAGAAC TGACGCGCGG CAAGGGCATC AGCCCTGAAG CGCTGCAGAC TTTCATCGAT
GGCCTGGACA TGCCGGCCGC TGCGAAAGCC GAGCTCAAGC AACTGACCCC GGCCAACTAC
ATCGGCAACG CTGTAGCGCA AGCCAAACGC ATCTGA
|
|---|
| Protein sequence | MIRAPFRCPT VREHPMQLSS LTAVSPVDGR YAGKTQALRP IFSEYGLIRA RVLVEVRWLQ
RLAAHAGIPE VPAFSAEANA VLNELAENFS LEHAERVKEI ERTTNHDVKA IEYLLKEQAA
KLPELAKVSE FIHFACTSED INNLSHALML REGRDDVMLP LMRQTANAIR ELAIRFADVP
MLSRTHGQPA SPTTLGKELA NVVYRLERQI AQVAAVPLLG KINGAVGNYN AHLSAYPQID
WEANARAFIE DELGLGFNPY TTQIEPHDYI AELFDAIARF NTILIDFDRD IWGYISLGYF
KQRTIAGEIG SSTMPHKVNP IDFENSEGNL GIANALFQHL ASKLPISRWQ RDLTDSTVLR
NLGVGFAHSV IAYEASLKGI SKLELNADKI AADLDACWEV LAEPIQTVMR RYNIENPYEK
LKELTRGKGI SPEALQTFID GLDMPAAAKA ELKQLTPANY IGNAVAQAKR I
|
|---|
| |