Gene Pfl01_3596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3596 
SymbolmnmA 
ID3714984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4064811 
End bp4065935 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content61% 
IMG OID 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_349325 
Protein GI77459818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGATC CAGCCCCTTC TGACACATCC AAGAAGCGCG TCATTGTCGG CATGTCCGGC 
GGCGTGGACT CTTCCGTTTC CGCTCTCCTG CTGATCGAGC AGGGCTATGA AGTGGAAGGC
CTGTTCATGA AGAACTGGGA AGAAGACGAC GGAACGGAAT ACTGCACCGC CATGGACGAC
CTGGCGGATG CCCAGGCCGT GTGCGACAAG ATCGGTATCA AGCTGCACAC CGCCAACTTC
GCCGCCGAGT ACTGGGACAA CGTGTTCGAG CACTTCCTGG CCGAATACAA GGCCGGCCGC
ACGCCGAACC CGGACATCCT GTGTAACCGC GAGATCAAGT TCAAGGCGTT CCTCGACTAC
GCCATGATGC TCGGCGCCGA TCTGATCGCC ACCGGTCACT ACGTGCGCCG TCGCGACATC
GATGGCCGCA CCGAACTGCT CAAGGGCCTG GATCCGAACA AGGATCAGAG CTACTTCCTG
CACGCTGTCG GCGGCGAACA GATCGCCAAG ACCCTGTTCC CGGTCGGCGA GCTGGAAAAA
CCGGAAGTCC GTGCAATTGC CGAGAAATAC GAGCTGGCGA CCGCCAAGAA GAAGGATTCC
ACCGGGATCT GCTTCATCGG CGAGCGTCGC TTCAGCGATT TCCTCAAGCA ATACCTGCCG
GCACAACCGG GCGAGATCAA GACCACCGAA GGCGAAGTCA TCGGCCGTCA CCACGGTTTG
ATGTACCACA CTATCGGCCA GCGTCAGGGC CTGGGCATCG GTGGTCTGAA AGACGCCGGC
GACGAGCCGT GGTACGTGCT GCGCAAGGAT CTGGACACCA ACGAGCTGAT CGTCGGTCAG
GGCAACAACC ATCCGTGGCT GTTCTCCAGC GCCCTGCTCG CTTCGGAAAT CTATTGGGTC
AATCCGATCG ATCTGAGCCA GCCGCTGCGT CTGACCGCCA AAGTCCGTTA TCGCCAGAGC
GATCAGGCCT GCACCCTTGA GAAAACCGAC ACCGGCTATC GCGCCGTGTT CGACGAGCCG
CAACGCGCGG TCACGCCGGG CCAGTCGGTG GTGTTCTATG ACGGTGAAAT CTGCCTCGGT
GGCGGCGTGA TCGAAGTCGC CGAGCCTTGG AGCGGCCAGG CATGA
 
Protein sequence
MRDPAPSDTS KKRVIVGMSG GVDSSVSALL LIEQGYEVEG LFMKNWEEDD GTEYCTAMDD 
LADAQAVCDK IGIKLHTANF AAEYWDNVFE HFLAEYKAGR TPNPDILCNR EIKFKAFLDY
AMMLGADLIA TGHYVRRRDI DGRTELLKGL DPNKDQSYFL HAVGGEQIAK TLFPVGELEK
PEVRAIAEKY ELATAKKKDS TGICFIGERR FSDFLKQYLP AQPGEIKTTE GEVIGRHHGL
MYHTIGQRQG LGIGGLKDAG DEPWYVLRKD LDTNELIVGQ GNNHPWLFSS ALLASEIYWV
NPIDLSQPLR LTAKVRYRQS DQACTLEKTD TGYRAVFDEP QRAVTPGQSV VFYDGEICLG
GGVIEVAEPW SGQA