Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3594 |
Symbol | |
ID | 3714982 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4062001 |
End bp | 4064226 |
Gene Length | 2226 bp |
Protein Length | 741 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | isocitrate dehydrogenase (NADP+) |
Protein accession | YP_349323 |
Protein GI | 77459816 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.942271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACCC GCTCGAAGAT CATCTATACC TTCACCGACG AAGCTCCAGC CCTCGCCACC TATTCCCTGC TGCCGATCAT CGAGGCCTAC ACCGCCTCGG CCGATATCGC CGTGGAAACC CGCGATATCT CTCTTGCAGC ACGCATTCTG GCCAGCTTCC CCGAGCAACT GGGCGACAAA GCCGTAGCCG ACCACCTCGC CGAACTGGGC GACCTGGCCG TTACGCCTGA AGCCAACATC ATCAAGCTGC CGAACATCAG CGCTTCGGTT CCGCAGTTGC AAGCCGCGAT CAAAGAACTG CAAGCCCAGG GCTACAACCT GCCGGACTAC CCGGAATCCG TGACCAACGA CGCCGAAAAA GAAGCCAAGG CGCGTTACGA CAAGGTCAAG GGCAGCGCCG TGAACCCGGT TCTGCGTGAA GGCAACTCCG ACCGTCGTGC GCCGCTGTCG GTCAAGAACT ACGCTCGCAA GCACCCGCAC AAAATGGGCG CCTGGGCCAA AGACTCCAAG TCTCATGTCG CTCACATGAG CACCGGCGAT TTCTATGGCA GCGAAAAAGC TGTCCTGATC GACGCCGCTG ACGCCGTGAA GATCGAACTG ATCGCCAAAG ACGGCACCGC GACCGTCCTG AAAGAAAAGA CCACCGTTCA GGCGGGCGAG ATCCTCGACT GCTCCGTGAT GAGCAAAAAG GCCCTGCGCG CGTTCATCGC CGCCGAAATC GACAGCGCCA AGCAGCAAGG CGTGCTGCTG TCGGTTCACC TGAAAGCCAC CATGATGAAG GTCTCCGACC CGATCATGTT CGGCCAGATC GTTGCCGAGT TCTACAAAGA CGCCCTGACC AAGCACGCCG ACGTGCTGGC CGAGATCGGC TTCAACCTGA ACAACGGCAT CGGCGACCTG TACGCCCGCA TCAAATCCCT GCCGGCCGAA CAACAAGCCC AGATCGAAGC TGACGTGCAG GCTGTCTACG CCGTTCGTCC GTCGCTGGCG ATGGTCAACT CCGACAAAGG CATCACCAAC CTGCACGTGC CGAGCGACGT TATCGTCGAC GCCTCGATGC CGGCCATGAT CCGTGACTCC GGCAAGATGT GGGGCACTGA CGGCCAGTTG CACGACACCA AGGCTGTGAT CCCGGATCGC TGCTACGCCA CCATCTACCA GGCCGTGATC GAAGATTGCA AAGCCAATGG CGCTTTCGAT CCGACCACCA TGGGCAGCGT GCCAAACGTT GGCCTGATGG CTAAAAAGGC TGAAGAGTAC GGCTCCCACG ACAAAACCTT CCAGATCAAG GCCGACGGCG TGGTTCGCGT GACCGACAGC AAAGGCACCC TGCTGATGGA ACAGGCTGTT GAAGCCGGCG ACATCTTCCG CATGTGCCAG ACCAAAGACG CGCCGATCCA GGACTGGGTC AAACTGGCCG TCAACCGTGC TCGCGCAAGC GCAACTCCAG CCATTTTCTG GCTGGACCCG ATGCGCGCCC ACGACGGCGT GGTGATCGAG AAGGTTCAGG CTTACCTGAA GGATCACGAC ACCGCCGGTC TGGACATCCA GATCATGGCG CCGGTCGATG CCATGAAATA CACCCTGCAG CGCACCCGCG AAGGCAAGGA CACCATTTCG GTGACCGGCA ACGTACTGCG CGACTACCTG ACAGACCTGT TCCCGATCAT GGAACTGGGC ACCAGCGCCA AGATGCTGTC GATCGTGCCG CTGATGAACG GCGGTGGCCT GTTCGAAACC GGCGCCGGCG GTTCGGCTCC GAAGCACGTG CAGCAACTGG TCGAAGAGAA CTTCCTGCGC TGGGATTCGC TGGGTGAATT CTTGGCCCTG GCCGCTTCTC TCGAGCACCT GGGTGTTAAC TACAACAACC CGAAAGCGCT GGTTCTGTCC AAGACCCTGG ATCAGGCCAC CGGCCAGTTC CTCGACAACA ACAAGTCGCC ATCGCGCAAA GTCGGCAACA TCGACAACCG CGGCAGCCAC TTCTACCTGG CGATGTACTG GGCACAAGCC CTGGCCGCCC AGACTGAAGA CGCTGCACTG CAAGCGCAGT TCGCGACTCT GGCCAAGACC CTGACCGAGA ACGAAGCGAC CATCGTCGCC GAGCTCAACG CCGTTCAAGG CAAGCCAGTG GACATCGGCG GTTACTACCA CGCCGATGCC GAGCTGATCA GCAAGGCCAT GCGCCCAAGC GCAACCCTCA ACGCGGCGAT TGCTGCGCTG GTATAA
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Protein sequence | MPTRSKIIYT FTDEAPALAT YSLLPIIEAY TASADIAVET RDISLAARIL ASFPEQLGDK AVADHLAELG DLAVTPEANI IKLPNISASV PQLQAAIKEL QAQGYNLPDY PESVTNDAEK EAKARYDKVK GSAVNPVLRE GNSDRRAPLS VKNYARKHPH KMGAWAKDSK SHVAHMSTGD FYGSEKAVLI DAADAVKIEL IAKDGTATVL KEKTTVQAGE ILDCSVMSKK ALRAFIAAEI DSAKQQGVLL SVHLKATMMK VSDPIMFGQI VAEFYKDALT KHADVLAEIG FNLNNGIGDL YARIKSLPAE QQAQIEADVQ AVYAVRPSLA MVNSDKGITN LHVPSDVIVD ASMPAMIRDS GKMWGTDGQL HDTKAVIPDR CYATIYQAVI EDCKANGAFD PTTMGSVPNV GLMAKKAEEY GSHDKTFQIK ADGVVRVTDS KGTLLMEQAV EAGDIFRMCQ TKDAPIQDWV KLAVNRARAS ATPAIFWLDP MRAHDGVVIE KVQAYLKDHD TAGLDIQIMA PVDAMKYTLQ RTREGKDTIS VTGNVLRDYL TDLFPIMELG TSAKMLSIVP LMNGGGLFET GAGGSAPKHV QQLVEENFLR WDSLGEFLAL AASLEHLGVN YNNPKALVLS KTLDQATGQF LDNNKSPSRK VGNIDNRGSH FYLAMYWAQA LAAQTEDAAL QAQFATLAKT LTENEATIVA ELNAVQGKPV DIGGYYHADA ELISKAMRPS ATLNAAIAAL V
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