Gene Pfl01_3594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3594 
Symbol 
ID3714982 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4062001 
End bp4064226 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content61% 
IMG OID 
Productisocitrate dehydrogenase (NADP+) 
Protein accessionYP_349323 
Protein GI77459816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.942271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC GCTCGAAGAT CATCTATACC TTCACCGACG AAGCTCCAGC CCTCGCCACC 
TATTCCCTGC TGCCGATCAT CGAGGCCTAC ACCGCCTCGG CCGATATCGC CGTGGAAACC
CGCGATATCT CTCTTGCAGC ACGCATTCTG GCCAGCTTCC CCGAGCAACT GGGCGACAAA
GCCGTAGCCG ACCACCTCGC CGAACTGGGC GACCTGGCCG TTACGCCTGA AGCCAACATC
ATCAAGCTGC CGAACATCAG CGCTTCGGTT CCGCAGTTGC AAGCCGCGAT CAAAGAACTG
CAAGCCCAGG GCTACAACCT GCCGGACTAC CCGGAATCCG TGACCAACGA CGCCGAAAAA
GAAGCCAAGG CGCGTTACGA CAAGGTCAAG GGCAGCGCCG TGAACCCGGT TCTGCGTGAA
GGCAACTCCG ACCGTCGTGC GCCGCTGTCG GTCAAGAACT ACGCTCGCAA GCACCCGCAC
AAAATGGGCG CCTGGGCCAA AGACTCCAAG TCTCATGTCG CTCACATGAG CACCGGCGAT
TTCTATGGCA GCGAAAAAGC TGTCCTGATC GACGCCGCTG ACGCCGTGAA GATCGAACTG
ATCGCCAAAG ACGGCACCGC GACCGTCCTG AAAGAAAAGA CCACCGTTCA GGCGGGCGAG
ATCCTCGACT GCTCCGTGAT GAGCAAAAAG GCCCTGCGCG CGTTCATCGC CGCCGAAATC
GACAGCGCCA AGCAGCAAGG CGTGCTGCTG TCGGTTCACC TGAAAGCCAC CATGATGAAG
GTCTCCGACC CGATCATGTT CGGCCAGATC GTTGCCGAGT TCTACAAAGA CGCCCTGACC
AAGCACGCCG ACGTGCTGGC CGAGATCGGC TTCAACCTGA ACAACGGCAT CGGCGACCTG
TACGCCCGCA TCAAATCCCT GCCGGCCGAA CAACAAGCCC AGATCGAAGC TGACGTGCAG
GCTGTCTACG CCGTTCGTCC GTCGCTGGCG ATGGTCAACT CCGACAAAGG CATCACCAAC
CTGCACGTGC CGAGCGACGT TATCGTCGAC GCCTCGATGC CGGCCATGAT CCGTGACTCC
GGCAAGATGT GGGGCACTGA CGGCCAGTTG CACGACACCA AGGCTGTGAT CCCGGATCGC
TGCTACGCCA CCATCTACCA GGCCGTGATC GAAGATTGCA AAGCCAATGG CGCTTTCGAT
CCGACCACCA TGGGCAGCGT GCCAAACGTT GGCCTGATGG CTAAAAAGGC TGAAGAGTAC
GGCTCCCACG ACAAAACCTT CCAGATCAAG GCCGACGGCG TGGTTCGCGT GACCGACAGC
AAAGGCACCC TGCTGATGGA ACAGGCTGTT GAAGCCGGCG ACATCTTCCG CATGTGCCAG
ACCAAAGACG CGCCGATCCA GGACTGGGTC AAACTGGCCG TCAACCGTGC TCGCGCAAGC
GCAACTCCAG CCATTTTCTG GCTGGACCCG ATGCGCGCCC ACGACGGCGT GGTGATCGAG
AAGGTTCAGG CTTACCTGAA GGATCACGAC ACCGCCGGTC TGGACATCCA GATCATGGCG
CCGGTCGATG CCATGAAATA CACCCTGCAG CGCACCCGCG AAGGCAAGGA CACCATTTCG
GTGACCGGCA ACGTACTGCG CGACTACCTG ACAGACCTGT TCCCGATCAT GGAACTGGGC
ACCAGCGCCA AGATGCTGTC GATCGTGCCG CTGATGAACG GCGGTGGCCT GTTCGAAACC
GGCGCCGGCG GTTCGGCTCC GAAGCACGTG CAGCAACTGG TCGAAGAGAA CTTCCTGCGC
TGGGATTCGC TGGGTGAATT CTTGGCCCTG GCCGCTTCTC TCGAGCACCT GGGTGTTAAC
TACAACAACC CGAAAGCGCT GGTTCTGTCC AAGACCCTGG ATCAGGCCAC CGGCCAGTTC
CTCGACAACA ACAAGTCGCC ATCGCGCAAA GTCGGCAACA TCGACAACCG CGGCAGCCAC
TTCTACCTGG CGATGTACTG GGCACAAGCC CTGGCCGCCC AGACTGAAGA CGCTGCACTG
CAAGCGCAGT TCGCGACTCT GGCCAAGACC CTGACCGAGA ACGAAGCGAC CATCGTCGCC
GAGCTCAACG CCGTTCAAGG CAAGCCAGTG GACATCGGCG GTTACTACCA CGCCGATGCC
GAGCTGATCA GCAAGGCCAT GCGCCCAAGC GCAACCCTCA ACGCGGCGAT TGCTGCGCTG
GTATAA
 
Protein sequence
MPTRSKIIYT FTDEAPALAT YSLLPIIEAY TASADIAVET RDISLAARIL ASFPEQLGDK 
AVADHLAELG DLAVTPEANI IKLPNISASV PQLQAAIKEL QAQGYNLPDY PESVTNDAEK
EAKARYDKVK GSAVNPVLRE GNSDRRAPLS VKNYARKHPH KMGAWAKDSK SHVAHMSTGD
FYGSEKAVLI DAADAVKIEL IAKDGTATVL KEKTTVQAGE ILDCSVMSKK ALRAFIAAEI
DSAKQQGVLL SVHLKATMMK VSDPIMFGQI VAEFYKDALT KHADVLAEIG FNLNNGIGDL
YARIKSLPAE QQAQIEADVQ AVYAVRPSLA MVNSDKGITN LHVPSDVIVD ASMPAMIRDS
GKMWGTDGQL HDTKAVIPDR CYATIYQAVI EDCKANGAFD PTTMGSVPNV GLMAKKAEEY
GSHDKTFQIK ADGVVRVTDS KGTLLMEQAV EAGDIFRMCQ TKDAPIQDWV KLAVNRARAS
ATPAIFWLDP MRAHDGVVIE KVQAYLKDHD TAGLDIQIMA PVDAMKYTLQ RTREGKDTIS
VTGNVLRDYL TDLFPIMELG TSAKMLSIVP LMNGGGLFET GAGGSAPKHV QQLVEENFLR
WDSLGEFLAL AASLEHLGVN YNNPKALVLS KTLDQATGQF LDNNKSPSRK VGNIDNRGSH
FYLAMYWAQA LAAQTEDAAL QAQFATLAKT LTENEATIVA ELNAVQGKPV DIGGYYHADA
ELISKAMRPS ATLNAAIAAL V