Gene Pfl01_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3593 
Symbol 
ID3714981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4060263 
End bp4061519 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content58% 
IMG OID 
Productisocitrate dehydrogenase (NADP) 
Protein accessionYP_349322 
Protein GI77459815 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTACA AGAAGATTCA GGTTCCAGCC GTCGGCGACA AAATCACCGT CAACGCAGAC 
CATTCTCTCA ATGTCCCTGA TAACCCGATC ATTCCCTTCA TCGAAGGTGA CGGCATTGGC
GTCGACGTCA GCCCTGTGAT GATCAAAGTG GTTGATGCTG CCGTAGAGAA AGCCTACGGG
GGTAAGCGCA AGATTTCCTG GATGGAGGTT TATGCTGGCG AAAAAGCAAC TCAGGTCTAT
GACCAGGACA CCTGGCTGCC CCAGGAAACC CTGGACGCGG TCAAGGATTA CGTGGTCTCC
ATCAAAGGCC CGCTGACCAC TCCGGTCGGT GGCGGCATCC GTTCCCTCAA CGTCGCCCTG
CGCCAACAGC TCGATCTCTA TGTCTGCCTT CGCCCTGTGG TGTGGTTCGA AGGTGTGCCG
AGCCCGGTGA AAAAGCCTGG CGACGTCGAC ATGGTGATCT TCCGCGAGAA CTCCGAAGAC
ATTTATGCCG GTATCGAATG GAAAGCCGGC TCCCCTGAGG CCACCAAGGT CATCAAATTC
CTGAAAGAAG AAATGGGCGT CACCAAGATC CGTTTCGACC AGGATTGCGG CATCGGCATC
AAGCCGGTTT CCAAAGAAGG CACCAAGCGT CTGGTGCGCA AGGCGCTGCA ATACGTGGTG
GACAACGACC GCAAGTCGCT GACCATCGTG CACAAGGGCA ACATCATGAA ATTCACCGAA
GGTGCCTTCA AGGACTGGGG CTACGAGGTG GCGAAGGAAG AATTCGGCGC CGAGCTGCTC
GATGGCGGCC CATGGATGAA ATTCAAGAAC CCGAAAACCG GCCGCGAAGT CGTCGTCAAG
GACGCCATCG CCGACGCCAT GCTCCAGCAG ATCCTGCTGC GTCCGGCCGA ATACGATGTG
ATCGCCACCC TCAACCTCAA CGGTGACTAC CTGTCCGACG CCCTGGCGGC GGAAGTGGGC
GGTATCGGTA TCGCGCCGGG TGCCAACCTG TCCGACACCG TAGCCATGTT CGAGGCGACC
CACGGTACTG CGCCGAAATA TGCCGGCAAG GACCAGGTCA ACCCGGGTTC GGTGATTTTG
TCGGCGGAAA TGATGCTGCG CCACCTGGGC TGGACCGAGG CGGCCGACCT GATCATCAAG
GGCACCAATG GCGCCATCAA GGCCAAGACC GTGACCTACG ACTTCGAACG TCTGATGGAA
GGCGCCACAC TGGTGTCTTC TTCGGGCTTC GGTGAAGCGC TGATCAAGCA CATGTAA
 
Protein sequence
MGYKKIQVPA VGDKITVNAD HSLNVPDNPI IPFIEGDGIG VDVSPVMIKV VDAAVEKAYG 
GKRKISWMEV YAGEKATQVY DQDTWLPQET LDAVKDYVVS IKGPLTTPVG GGIRSLNVAL
RQQLDLYVCL RPVVWFEGVP SPVKKPGDVD MVIFRENSED IYAGIEWKAG SPEATKVIKF
LKEEMGVTKI RFDQDCGIGI KPVSKEGTKR LVRKALQYVV DNDRKSLTIV HKGNIMKFTE
GAFKDWGYEV AKEEFGAELL DGGPWMKFKN PKTGREVVVK DAIADAMLQQ ILLRPAEYDV
IATLNLNGDY LSDALAAEVG GIGIAPGANL SDTVAMFEAT HGTAPKYAGK DQVNPGSVIL
SAEMMLRHLG WTEAADLIIK GTNGAIKAKT VTYDFERLME GATLVSSSGF GEALIKHM