Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3593 |
Symbol | |
ID | 3714981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4060263 |
End bp | 4061519 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | isocitrate dehydrogenase (NADP) |
Protein accession | YP_349322 |
Protein GI | 77459815 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTTACA AGAAGATTCA GGTTCCAGCC GTCGGCGACA AAATCACCGT CAACGCAGAC CATTCTCTCA ATGTCCCTGA TAACCCGATC ATTCCCTTCA TCGAAGGTGA CGGCATTGGC GTCGACGTCA GCCCTGTGAT GATCAAAGTG GTTGATGCTG CCGTAGAGAA AGCCTACGGG GGTAAGCGCA AGATTTCCTG GATGGAGGTT TATGCTGGCG AAAAAGCAAC TCAGGTCTAT GACCAGGACA CCTGGCTGCC CCAGGAAACC CTGGACGCGG TCAAGGATTA CGTGGTCTCC ATCAAAGGCC CGCTGACCAC TCCGGTCGGT GGCGGCATCC GTTCCCTCAA CGTCGCCCTG CGCCAACAGC TCGATCTCTA TGTCTGCCTT CGCCCTGTGG TGTGGTTCGA AGGTGTGCCG AGCCCGGTGA AAAAGCCTGG CGACGTCGAC ATGGTGATCT TCCGCGAGAA CTCCGAAGAC ATTTATGCCG GTATCGAATG GAAAGCCGGC TCCCCTGAGG CCACCAAGGT CATCAAATTC CTGAAAGAAG AAATGGGCGT CACCAAGATC CGTTTCGACC AGGATTGCGG CATCGGCATC AAGCCGGTTT CCAAAGAAGG CACCAAGCGT CTGGTGCGCA AGGCGCTGCA ATACGTGGTG GACAACGACC GCAAGTCGCT GACCATCGTG CACAAGGGCA ACATCATGAA ATTCACCGAA GGTGCCTTCA AGGACTGGGG CTACGAGGTG GCGAAGGAAG AATTCGGCGC CGAGCTGCTC GATGGCGGCC CATGGATGAA ATTCAAGAAC CCGAAAACCG GCCGCGAAGT CGTCGTCAAG GACGCCATCG CCGACGCCAT GCTCCAGCAG ATCCTGCTGC GTCCGGCCGA ATACGATGTG ATCGCCACCC TCAACCTCAA CGGTGACTAC CTGTCCGACG CCCTGGCGGC GGAAGTGGGC GGTATCGGTA TCGCGCCGGG TGCCAACCTG TCCGACACCG TAGCCATGTT CGAGGCGACC CACGGTACTG CGCCGAAATA TGCCGGCAAG GACCAGGTCA ACCCGGGTTC GGTGATTTTG TCGGCGGAAA TGATGCTGCG CCACCTGGGC TGGACCGAGG CGGCCGACCT GATCATCAAG GGCACCAATG GCGCCATCAA GGCCAAGACC GTGACCTACG ACTTCGAACG TCTGATGGAA GGCGCCACAC TGGTGTCTTC TTCGGGCTTC GGTGAAGCGC TGATCAAGCA CATGTAA
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Protein sequence | MGYKKIQVPA VGDKITVNAD HSLNVPDNPI IPFIEGDGIG VDVSPVMIKV VDAAVEKAYG GKRKISWMEV YAGEKATQVY DQDTWLPQET LDAVKDYVVS IKGPLTTPVG GGIRSLNVAL RQQLDLYVCL RPVVWFEGVP SPVKKPGDVD MVIFRENSED IYAGIEWKAG SPEATKVIKF LKEEMGVTKI RFDQDCGIGI KPVSKEGTKR LVRKALQYVV DNDRKSLTIV HKGNIMKFTE GAFKDWGYEV AKEEFGAELL DGGPWMKFKN PKTGREVVVK DAIADAMLQQ ILLRPAEYDV IATLNLNGDY LSDALAAEVG GIGIAPGANL SDTVAMFEAT HGTAPKYAGK DQVNPGSVIL SAEMMLRHLG WTEAADLIIK GTNGAIKAKT VTYDFERLME GATLVSSSGF GEALIKHM
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