| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3584 |
|---|
| Symbol | |
|---|
| ID | 3714569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 4049464 |
|---|
| End bp | 4050789 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | |
|---|
| Product | recombination factor protein RarA |
|---|
| Protein accession | YP_349313 |
|---|
| Protein GI | 77459806 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.1367 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.488195 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGGATC TGTTTCGCAG TGCACCGATT GCCCAGCCAC TGGCTGCCCG TTTGCGGGCG
ACCAATCTGG ATGAGTACGT CGGCCAGGAA CACGTGCTCG CTCGCGGCAA GCCTCTGCGT
GAAGCGCTGG AGCAGGGTGC CCTGCATTCG ATGATCTTCT GGGGCCCGCC GGGCGTGGGC
AAGACCACGT TGGCGCGGTT GCTGGCAGAA GTCTCGGATG CGCACTTCGA AACGGTTTCG
GCGGTGCTGG CCGGGGTCAA GGAGATCCGT CAGGCGGTGG AAATCGCCAA GCAGCAGGCC
GGCCAGTACG GCAAGCGCAC GATCCTGTTT GTCGATGAAG TGCACCGCTT CAACAAGTCT
CAACAGGACG CCTTCCTGCC GTACGTTGAA GACGGCACGC TGATCTTCAT TGGCGCCACC
ACTGAAAACC CTTCGTTCGA ACTGAACAAT GCATTGCTGT CGCGAGCGCG GGTCTACGTA
CTCAAAAGCC TCGACGAGGC AGCGTTGCGC AAGTTGGTGC ACCGCGCGCT GACTGAAGAG
CGTGGCCTGG GCAAACGTCA TCTGACCCTC AGCGATGAAG GCTTCCAGAT GCTGCTGTCC
GCCGCCGATG GCGATGGCCG GCGCCTGCTG AATCTGCTGG AGAACGCCTC GGACCTCGCC
GAAGACAACA GTGAGATGGG CACCGAGCTG CTGCAAAGCC TGCTCGGAGA CACTCGCCGG
CGTTTCGACA AGGGCGGCGA AGCGTTCTAC GACCAGATTT CCGCGCTGCA CAAATCGGTT
CGCGGCTCGA ATCCTGACGG CGCGCTGTAC TGGTTTGCGC GAATGATCGA CGGCGGCTGC
GATCCGCTGT ACCTCGCCCG GCGGGTGGTG CGGATGGCCA GCGAAGACAT TGGCAACGCC
GATCCTCGCG CCCTGAGCCT GTGCCTGGCC GCGTGGGAAG TGCAGGAACG TCTAGGCAGC
CCGGAAGGTG AGTTGGCAGT GGCGCAGGCC ATCACTTATC TGGCCTGTGC GCCGAAAAGC
AACGCGGTGT ACATGGGTTT CAAGACCGCA CTGCGCGCTG CCGCCGAACA CGGTTCGCTG
GAAGTGCCGC TACATCTGCG CAATGCGCCG ACCAAATTGA TGAAGCAATT GGGTTATGGC
GACGAATACC GTTACGCCCA CGACGAACCG GACGCCTACG CGGCTGGCGA AGACTATTTC
CCGGAAGAGC TCGACCCGAT TCCGTTCTAC CAACCGGTGC CCCGTGGCCT GGAATTGAAG
ATCGGCGAAA AGCTCAACCA CCTCGCCCAA CTTGATCGTT TAAGCCCTCG GCAGCGGAGA
AAATAG
|
|---|
| Protein sequence | MMDLFRSAPI AQPLAARLRA TNLDEYVGQE HVLARGKPLR EALEQGALHS MIFWGPPGVG
KTTLARLLAE VSDAHFETVS AVLAGVKEIR QAVEIAKQQA GQYGKRTILF VDEVHRFNKS
QQDAFLPYVE DGTLIFIGAT TENPSFELNN ALLSRARVYV LKSLDEAALR KLVHRALTEE
RGLGKRHLTL SDEGFQMLLS AADGDGRRLL NLLENASDLA EDNSEMGTEL LQSLLGDTRR
RFDKGGEAFY DQISALHKSV RGSNPDGALY WFARMIDGGC DPLYLARRVV RMASEDIGNA
DPRALSLCLA AWEVQERLGS PEGELAVAQA ITYLACAPKS NAVYMGFKTA LRAAAEHGSL
EVPLHLRNAP TKLMKQLGYG DEYRYAHDEP DAYAAGEDYF PEELDPIPFY QPVPRGLELK
IGEKLNHLAQ LDRLSPRQRR K
|
|---|
| |