Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3569 |
Symbol | |
ID | 3714554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4039321 |
End bp | 4039956 |
Gene Length | 636 bp |
Protein Length | 211 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | chitin-binding domain-containing protein |
Protein accession | YP_349298 |
Protein GI | 77459791 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.833618 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.488195 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCAAC CACAAGCTCA AACCCAACTG CGACACGGTC GCGTCATTTC CCCTGCAAGC CGCGGCGCGG TGGCCATCGA GCAAGGATTG CTCGGCGGCT GGCAGGTCAA TGAAATGGAA GGTGGCAAGA ACTTCCCGGC ACTCGCGGCC GGTCCGTTCC CGGCGCCGTT CGAAAGCGAC AACCCGAGCG TCGTACCGCC TGCTGACGGC TATATTCTCA GTGGCGGCAA GAACGATGCA CGTGACTGCG TGAACTTCAC TGCAGAAGAA ATGAGCAAGA AACTCGGGCG TCCGTTCTCC TGGCCGCTGC TCAATGTCAC TCCCGGCCAG ACCCTTGAGG TCAAATGGGA GTACACCGCA CCGCACACCA CCCGCGGTTA CCGCTGGCTG ATCACCAAGG ATGGCTGGGA CCCGAAACAA CGCATCACCC GAGCGCAGCT GGAGGCGCAA CCGTTCGCCG AGGATTTCTA TCCGCAAGTC CCGTACTACA GTCATGCGGC GGAATTGAAA GCCAAGGTCA ATCACGCGGT GAAACTTCCA GGCAACAAGC AAGGGCATCA CGTCATCGTC CTGATGTGGA TCGTCGCCAA CACCGGCAAC GCCTTCTATC AGGCCTTCGA TGTGGACTTC AAATAA
|
Protein sequence | MNQPQAQTQL RHGRVISPAS RGAVAIEQGL LGGWQVNEME GGKNFPALAA GPFPAPFESD NPSVVPPADG YILSGGKNDA RDCVNFTAEE MSKKLGRPFS WPLLNVTPGQ TLEVKWEYTA PHTTRGYRWL ITKDGWDPKQ RITRAQLEAQ PFAEDFYPQV PYYSHAAELK AKVNHAVKLP GNKQGHHVIV LMWIVANTGN AFYQAFDVDF K
|
| |