Gene Pfl01_3568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3568 
Symbol 
ID3714553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4038219 
End bp4039280 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content61% 
IMG OID 
Productglycosyl hydrolase family chitinase 
Protein accessionYP_349297 
Protein GI77459790 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.285696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACA TCGACTTCAC CCTATTGAAA AACCAGGCCA GCGACGCGGC GTCGCTGATG 
CCGAGCCTTG CCGGCAAGAA GATCCTCATG GGCTTCTGGC ACAACTGGCC GGCCGGCCCG
AGCGATGGTT ACCAGCGCGG CCAGTTCGCC AACATCGCCC TGGAAAACGT GCCGAAGGAG
TACAACGTGG TCGCGGTGGC CTTCATGAAG GGCAGCGGGA TTCCGACCTT CAAGCCGTTC
AACGTCTCCG ATGCCGAGTT CCGCCGTCAG GTCGGCGTGC TCAACAGTCA GGGGCGGGCC
GTGCTGATTT CCCTGGGCGG TGCCGATGCG CACATCGAGT TGCGCGCCGG CCAGGAGCAA
CCACTGGCCA ATGAAATCAT CCGTCTGGTG GAAACCTACG GTTTTGATGG CCTGGACATC
GATCTTGAAC AGAGCGCGAT TGATTTCGCC GCCAACAAGA CCGTCCTGCC AGCCGCGCTG
AAACTGGTCA AGGATCACTA CGCCGGCCAA GGCAAGCATT TCATCATCAG CATGGCGCCG
GAGTTCCCGT ACCTGACCAC CTCCGGCAAA TACGTCGGTT ATCTGCAGGC GCTGGAAGGC
TATTACGACT TCATCGCTCC GCAGTTCTAC AACCAGGGCG GCGACGGGGT CTGGGTGCCG
GAGGCCAATA ACGGCAACGG GGCGTGGATC GCCCAGAACA ACGACACGAT GAAAGAAGAC
TTCCTCTATT ACCTGACCGA GAGCCTGGTC ACCGGCACTC GCGGTTTTAC GAAGATCCCG
GCGGACAAGT TCGTCATCGG CCTGCCGGCC AACGTCGATG CCGCCGCCAC CGGTTACGTG
ATCGACAAAA CCGTGGTCGG CAACGCGATG AAACGCCTGG CGGTCAAAGG GCATCCGATC
AAGGGCCTGA TGACCTGGTC GGTGAACTGG GACAACGGCA CCAGCAAGGA TCGCGTGCCG
TACGACTGGG AATTCAGTCG GCGTTACGGA CCGCTGATTC ACGGGGCGCC GTCTGCGGTG
CAGGGCGCTG ATGCCGCAAC GGTGAGCGTC GCTCATCAGT AG
 
Protein sequence
MSNIDFTLLK NQASDAASLM PSLAGKKILM GFWHNWPAGP SDGYQRGQFA NIALENVPKE 
YNVVAVAFMK GSGIPTFKPF NVSDAEFRRQ VGVLNSQGRA VLISLGGADA HIELRAGQEQ
PLANEIIRLV ETYGFDGLDI DLEQSAIDFA ANKTVLPAAL KLVKDHYAGQ GKHFIISMAP
EFPYLTTSGK YVGYLQALEG YYDFIAPQFY NQGGDGVWVP EANNGNGAWI AQNNDTMKED
FLYYLTESLV TGTRGFTKIP ADKFVIGLPA NVDAAATGYV IDKTVVGNAM KRLAVKGHPI
KGLMTWSVNW DNGTSKDRVP YDWEFSRRYG PLIHGAPSAV QGADAATVSV AHQ