Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3567 |
Symbol | |
ID | 3714552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4037521 |
End bp | 4038111 |
Gene Length | 591 bp |
Protein Length | 196 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | nucleoside diphosphate pyrophosphatase |
Protein accession | YP_349296 |
Protein GI | 77459789 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.267523 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAACA CAACCGAGAG GGTCAACATC GTCGATACCC AGGTGTTGTC CCACGACTGG TATCTGCTGA AGAAAATCAC CTTCGACTAC CACCGCAACA ACGGTGACTG GCAGCGTCAG ACGCGCGAGG TTTACGACCG TGGCAATGGC GCGGCGATTC TGCTGTTCAA CCGCGAGCAA CGCACCGTGG TGCTGACCCG GCAGTTCCGC CTGCCGGTGT TCGTCAACGG TCACGACGGC TTGCTGATTG AAGTGGCGGC CGGACTGCTT GAAGGCGCGG CGCCGGAGCA GCGCATTCGC GACGAGGCCG AGGAAGAAAC CGGCTACCGC GTGCATGACG TGAAGAAGGT GTTCGAGGCC TACATGAGTC CCGGCTCGGT GACCGAGAAG CTGCACTTTT TCATCGCCGA GTACGATGCT TCGTCAAAGG TCAGTGAAGG GGGCGGTCTG GAAGAAGAGA CCGAGGAACT TGAAGTGCTG GAGTGGCGTT TCGAGGACGC GCTGGCGGCG TTCCAGCGGG GTGAAATCTG CGATGCCAAG ACCATCATGC TGCTGCAGTA TGCGGCGATG AATAACCTGT TTGGCGGTTA A
|
Protein sequence | MSNTTERVNI VDTQVLSHDW YLLKKITFDY HRNNGDWQRQ TREVYDRGNG AAILLFNREQ RTVVLTRQFR LPVFVNGHDG LLIEVAAGLL EGAAPEQRIR DEAEEETGYR VHDVKKVFEA YMSPGSVTEK LHFFIAEYDA SSKVSEGGGL EEETEELEVL EWRFEDALAA FQRGEICDAK TIMLLQYAAM NNLFGG
|
| |