Gene Pfl01_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3563 
Symbol 
ID3713882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4033418 
End bp4034437 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content57% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349292 
Protein GI77459785 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.13554 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTT TCAATCTCCG TCACGCCTTG CAGCTGACGT GTCTCGTATT TGCTACCGCC 
TCCCACGCTG CCAGTTTTGA CTGTGCTGGC GCTTCCAGCC CCGTTGAAAA AGCCGTTTGT
GCGGATCCGT ATACCTCGAG TCTCGATGAG AAACTCGGGG CGCTCTGGCA GACAACGTTG
GCGCAGGTGG CTGACCCGCA AGCGCTCAAG GCTGATCAGC GTTCATGGTT GAAACAACGC
AATCAATGCG CTGCCAATAG CTCCTGCCTG CGCCGTGAGT ATTTGATGCG TCTGAAAGCG
CTTGAATACG TGGCCAAGCC TTTCAGCTGG GATGCCACCT GGCAGATGAT TCCGTGGGGC
GTTTCATCGG CGGCAGAAGT CACAACCAAG CGTTTGGACG CCACGCATAT TGCCTTTGAT
GTTTCTGCGT CAAATGGTGG CAACTCTGGT GACATGGACG GTGTGGCCAC AATTGACGGT
GCCGTAGCGC ATTTCGCTGA AGGCAACTGC ACCCTGAAAT TCAGCGCGCT CAACGGTTTG
CTGGATGTTG ATTCCGATGG CGGTGAGGGG GCTTGTGGTG GCGGGATGGG CGTTTACTAC
GATGGAAGGT ATGTGGCATC TGACCAACCG ATCGCGATTG AATACGACTT GCTGAGCCTT
GGCGTCGTGC GTACGCAGCA AGAAGATCAG GCATTACGCA CGTTGCTCAA AAGTGACTAT
CAGACGCTGC TGCAAAATAG CGGCTCAATG GCAACCGGCG AGACCTCTCG TGATGTGCCG
GGGAGTGAGG TCAATGAGTT CTGGCTGCGA GGTCTGGCTT CCAGCAACGC GGCGATTCTG
ATGAGCGCGC CGGGAGGCCG AGTTTGGCTG GTGCTATTGG TTTTCGATGA GCAACGCAAA
GTCAGGGCGC GGTATTACAC CAACGTTCCC AAATGGAAAA AGCGGGTGCC TGATGTGCTG
TTGGCGTGGC GTGAACGCTT GGCGGGAGAG GCGACACTGC CTCTGGACCT GATGCCCTGA
 
Protein sequence
MLAFNLRHAL QLTCLVFATA SHAASFDCAG ASSPVEKAVC ADPYTSSLDE KLGALWQTTL 
AQVADPQALK ADQRSWLKQR NQCAANSSCL RREYLMRLKA LEYVAKPFSW DATWQMIPWG
VSSAAEVTTK RLDATHIAFD VSASNGGNSG DMDGVATIDG AVAHFAEGNC TLKFSALNGL
LDVDSDGGEG ACGGGMGVYY DGRYVASDQP IAIEYDLLSL GVVRTQQEDQ ALRTLLKSDY
QTLLQNSGSM ATGETSRDVP GSEVNEFWLR GLASSNAAIL MSAPGGRVWL VLLVFDEQRK
VRARYYTNVP KWKKRVPDVL LAWRERLAGE ATLPLDLMP