Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3555 |
Symbol | |
ID | 3713874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4027361 |
End bp | 4028182 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | AraC family transcriptional regulator |
Protein accession | YP_349284 |
Protein GI | 77459777 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.152356 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCGCC TGTCCACCTT GCTCAGTCAT TTCGGCGTCA ATGCCGGTAC GTTTCACAGC GGCACGTTCT GCGGGGTGAG CGCCTACGGC GGCGATCAGG TGTGCGGGCA TGTGCACCTG TTGCAGGCGG GGGAATTGTT GCTCAAGCCG GGCAATGATC CTGAACTCTC GCTCAATGAA CCGACCCTGA TCTTTTTCCC GCGCCCCATG GCCCATCGCC TGTTCGCCAA CGAAGCCATG GGCACGCAAC TGGTGTGCGC CTCACTGACC TTCGACGGCG GCGCGGGCAA TGCTTTGGCG GCAGCGCTAC CGGATTATCT GGTGCTGAAA CTCGCTGACC TTCCCGAAAT GGCCAACACC CTGGAGTGGC TGTTCAAGGA AGCTTTCGAC GGACACTGCG GGCGCGAAGC GGTGATGGAC CGGCTGTTCG AGTTGCTGGT GATTCTGCTG TTGCGCCACC TCATCAGCAG CCAGAACCAG CAGCCGGGCA TGATGGCGGG GCTGGCCGAT CCGAAGATTT CCCGAGCCTT GAACCTGATG CACGAGCAGC CGGCCAAGGC CTGGAGTGTC GCCGAACTGG CAAGCGCGGC CAATCTGTCC CGCGCCGGTT TTGCCGAACA TTTCCGGCGG GTAGTGGGGC AGACGCCGGT GGATTATCTG GTGAACTGGC GGATCAGCCT CGCGCAGAAA CGCCTGCGCG AGGGACGGCC GATCGCCCTG ATCGCCGAAG AGGTCGGCTA TGAAAGTCCC TCGGCGCTGG CCCGGGCGTT TCGGCGCAAG ACCGGGCTCA GCCCGCGTGA ATGGAAGGCC GGTGCGAGCT GA
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Protein sequence | MDRLSTLLSH FGVNAGTFHS GTFCGVSAYG GDQVCGHVHL LQAGELLLKP GNDPELSLNE PTLIFFPRPM AHRLFANEAM GTQLVCASLT FDGGAGNALA AALPDYLVLK LADLPEMANT LEWLFKEAFD GHCGREAVMD RLFELLVILL LRHLISSQNQ QPGMMAGLAD PKISRALNLM HEQPAKAWSV AELASAANLS RAGFAEHFRR VVGQTPVDYL VNWRISLAQK RLREGRPIAL IAEEVGYESP SALARAFRRK TGLSPREWKA GAS
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