Gene Pfl01_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3555 
Symbol 
ID3713874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4027361 
End bp4028182 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content63% 
IMG OID 
ProductAraC family transcriptional regulator 
Protein accessionYP_349284 
Protein GI77459777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.152356 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGCC TGTCCACCTT GCTCAGTCAT TTCGGCGTCA ATGCCGGTAC GTTTCACAGC 
GGCACGTTCT GCGGGGTGAG CGCCTACGGC GGCGATCAGG TGTGCGGGCA TGTGCACCTG
TTGCAGGCGG GGGAATTGTT GCTCAAGCCG GGCAATGATC CTGAACTCTC GCTCAATGAA
CCGACCCTGA TCTTTTTCCC GCGCCCCATG GCCCATCGCC TGTTCGCCAA CGAAGCCATG
GGCACGCAAC TGGTGTGCGC CTCACTGACC TTCGACGGCG GCGCGGGCAA TGCTTTGGCG
GCAGCGCTAC CGGATTATCT GGTGCTGAAA CTCGCTGACC TTCCCGAAAT GGCCAACACC
CTGGAGTGGC TGTTCAAGGA AGCTTTCGAC GGACACTGCG GGCGCGAAGC GGTGATGGAC
CGGCTGTTCG AGTTGCTGGT GATTCTGCTG TTGCGCCACC TCATCAGCAG CCAGAACCAG
CAGCCGGGCA TGATGGCGGG GCTGGCCGAT CCGAAGATTT CCCGAGCCTT GAACCTGATG
CACGAGCAGC CGGCCAAGGC CTGGAGTGTC GCCGAACTGG CAAGCGCGGC CAATCTGTCC
CGCGCCGGTT TTGCCGAACA TTTCCGGCGG GTAGTGGGGC AGACGCCGGT GGATTATCTG
GTGAACTGGC GGATCAGCCT CGCGCAGAAA CGCCTGCGCG AGGGACGGCC GATCGCCCTG
ATCGCCGAAG AGGTCGGCTA TGAAAGTCCC TCGGCGCTGG CCCGGGCGTT TCGGCGCAAG
ACCGGGCTCA GCCCGCGTGA ATGGAAGGCC GGTGCGAGCT GA
 
Protein sequence
MDRLSTLLSH FGVNAGTFHS GTFCGVSAYG GDQVCGHVHL LQAGELLLKP GNDPELSLNE 
PTLIFFPRPM AHRLFANEAM GTQLVCASLT FDGGAGNALA AALPDYLVLK LADLPEMANT
LEWLFKEAFD GHCGREAVMD RLFELLVILL LRHLISSQNQ QPGMMAGLAD PKISRALNLM
HEQPAKAWSV AELASAANLS RAGFAEHFRR VVGQTPVDYL VNWRISLAQK RLREGRPIAL
IAEEVGYESP SALARAFRRK TGLSPREWKA GAS