| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3550 |
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| Symbol | |
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| ID | 3713869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas fluorescens Pf0-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007492 |
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| Strand | + |
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| Start bp | 4022221 |
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| End bp | 4023900 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | diguanylate cyclase |
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| Protein accession | YP_349279 |
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| Protein GI | 77459772 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.953301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.354246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAAAG CCAGTCTGCG CAGCCACCTG ACCCTATGGT TTGCCGGTTT GTCTCTGCTG
ACGCTGTTGA GCGTGGGCTT CTACGTCGGT GATATCGCCA CCGAACAAAT GAAACGCGCC
AGCGGCAATG CGCTACTGAG TACCGCGCGG TCGGCGGCGG CGCTGCTGGG CGAGCAGCTG
CGCGAACGGC AACTGGAGGT CTATCTGCTC AGCCGGGCGC CGCATCTGGA ACGCGGTGAT
CTGGACAATC CGGCGATTCT CAAATCGATG CAGCTGCGCA CCGAGGCCCG CACCGAGTAT
GCGTGGATGG GGGTGACCGA TGCTCAGGGC CGTGTGCATC AGGCAGTCAA CGGTTTGCTG
GTCGGTCAGG CCGTGCAACA ACGCCCCTGG TTCCAGGCTG GTCTGCGCGG TGAATACACC
GGCGATCCGC ACGAAGCCGT GTTGTTGGCG AAACTGTTGC CAGGCCTGCC CAACGGCGAG
CCACTGCGCT TCATCGACTT CGCCGCGCCT ATCCGCAATG CCGATGGTCA GGTGATCGGT
GTGCTCGGCG CCCATGCGCA CTGGAGCTGG GTTACGCATA TCGTCGAATC CGCAGCCATG
TCGCACAAGG GAGCGGAGCC GGACATCGAA GCGCTGATCA TCGATCACGA CGGCAAGGTG
CTGTACCCGG AAGCGCTGGT TGGCCAGCAG ATGCCGGCCA AGGATCCGAA CTCCCCGGGA
TGGGTCGTCG GCAACGGGTA CCTGACCAGC GAGGTGACGG TACCGACTCC TACAGGCACC
GCGCTGTCGT GGTCGATTGC CGTGCGCCAA CCACTGGACA CTGCGCTGCA ACCGGCGCGA
CTGCTGTTTT ATAAATTGCT GCTGCTGGGG GTTTTCGCCG CCGTGGCGTT CGGGCTCGTG
GCGTATTACC TGGCGCTGTA CCTGAGCCGG CCCATCGAGC AACTCGCGCG TTCTGCGCAA
AAAGTGCAGA ACAACCAACC GGGGGCCCAC TTCCCGCTCC GGCATCCCGT GCGGGAAATT
GCCCAGCTCG GCCAGTCCAT CGATGCCATG ACCCAGTCGC TGCTCGCCAA GGAACGTGAG
CTGCAGGAGA CCAACGCATC GCTCGAAGCC ACCGTCGCCC AACGCACAGC GGCCCTGACC
CTGGCCAACG CCGAGCTGCT GAACCTGGCC ACCCACGATG GCTTGACCGG TGTCTACAAC
CGGCGCCGCT TCGACGAAAA ACTCACCGAA TACAGCCTGT TGTTCCGTCG TACCGGACGA
CCGTTTGCAC TGCTTCTGAT TGACGCCGAT CACTTCAAGC GCATCAACGA CACTCATGGT
CATGCGGCCG GCGACGACGT ACTGCGGCAA TTGGCGCAAC TGATCCAGAT CAGTATCCGG
AGCACGGATT TCGTCGCCCG TTACGGAGGC GAAGAATTCG CTGTGCTGCT GCCGGAAATC
GCCAAGCCCG ATACTCCCGA TATCGTCGCC GAGAAGATTC GGTCAGCGAT TGCCGAGGCG
GACTTTCCAG CGGTCGGCCC GGTGACGGTC AGCATTGGTG TCAGCCTGGC CGACCCGGCC
GACAACACCC CGACAACGCT GGTCAAACGC GCCGACCAGC AGTTGTACAA GGCAAAAGCG
GCAGGCCGCA ATCAAGTGGC CTGCCAGGCT TCGCTCTTCG AGGTGAGCGA AAATGGCTGA
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| Protein sequence | MLKASLRSHL TLWFAGLSLL TLLSVGFYVG DIATEQMKRA SGNALLSTAR SAAALLGEQL
RERQLEVYLL SRAPHLERGD LDNPAILKSM QLRTEARTEY AWMGVTDAQG RVHQAVNGLL
VGQAVQQRPW FQAGLRGEYT GDPHEAVLLA KLLPGLPNGE PLRFIDFAAP IRNADGQVIG
VLGAHAHWSW VTHIVESAAM SHKGAEPDIE ALIIDHDGKV LYPEALVGQQ MPAKDPNSPG
WVVGNGYLTS EVTVPTPTGT ALSWSIAVRQ PLDTALQPAR LLFYKLLLLG VFAAVAFGLV
AYYLALYLSR PIEQLARSAQ KVQNNQPGAH FPLRHPVREI AQLGQSIDAM TQSLLAKERE
LQETNASLEA TVAQRTAALT LANAELLNLA THDGLTGVYN RRRFDEKLTE YSLLFRRTGR
PFALLLIDAD HFKRINDTHG HAAGDDVLRQ LAQLIQISIR STDFVARYGG EEFAVLLPEI
AKPDTPDIVA EKIRSAIAEA DFPAVGPVTV SIGVSLADPA DNTPTTLVKR ADQQLYKAKA
AGRNQVACQA SLFEVSENG
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