Gene Pfl01_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3542 
Symbol 
ID3713842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4018090 
End bp4018689 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349271 
Protein GI77459764 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.153995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATACCG AGCTTCGTCA TGACGACCGC AGAAACCCAA TGATGCTAAA AGCCAATCTT 
CATGCACTCA TGGCAAGTGA TCGCGCACGC ATGCAAATTC TTGAGATTGT AAGAGGATTG
CAGTTGCGTG ATTGCTGGGT CGCCGCCGGA TTCGTACGTA GTCTGGTCTG GGATCATCTT
CATGGACGCG CGTTTTCAGC ATTGCCTTCG GATGTAGACG TCATCTGGTA CGACGCGGAT
GACGCAAGTC CAGAGCGGGA CGCTCAGTTG GAGTCACTGC TAATGACGCT GGACAGCAGC
ATAAGTTGGT CGGTCAAGAA TCAGGCAAGA ATGCATCAGC GTAACGCAGA TCAGCCTTAT
GCTTGTGCAA CCGAGGCAAT GATGTTCTGG CCTGAGACGG CCACAGCCAT AGGCGTCAGA
CTTGGTGCCA ACGGCATTAT TGAAATAGCT GCACCCTTGG GCCTGCAGGA TCTGTTTTCC
CTCGTTGTTC GCCCTACGAG CAGGTTCCTC GCCGAGAAGC ATTCGATCTA TCTGGAGCGC
GTCCGCGCCA AGTGCTGGCA TCTTGATTGG CCACTTTTGC AGATCATGAT GGAACGATGA
 
Protein sequence
MHTELRHDDR RNPMMLKANL HALMASDRAR MQILEIVRGL QLRDCWVAAG FVRSLVWDHL 
HGRAFSALPS DVDVIWYDAD DASPERDAQL ESLLMTLDSS ISWSVKNQAR MHQRNADQPY
ACATEAMMFW PETATAIGVR LGANGIIEIA APLGLQDLFS LVVRPTSRFL AEKHSIYLER
VRAKCWHLDW PLLQIMMER