Gene Pfl01_3534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3534 
Symbol 
ID3713834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4012059 
End bp4012643 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content63% 
IMG OID 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_349263 
Protein GI77459756 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.744175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.285696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCAT TGATTGTTGT TGATCACGAT GATCCACGTT CGCTGACCCA CGCGTTGGCG 
CAGCAGATTG CCAACGGCCT GTCGGCAAGC GATCCCTCCA ACACCTTCGA AATCGCCGAC
CTGCACGCCG AAGAATTCGA CCCACGCTTT GGTGTGGCCG ACTGGGCGGT GCATCACCGC
GAATCCGCGC CACCGGCGGA CGTGCTGGCC GAGCAGGCAC GCATCGACCG CGCCGATGCG
CTGGTGCTGG TCTATCCGGT GTTCTGGTGG TCGATGCCGG CGCTGCTCAA AGGCTGGATC
GACCGGGTGT TCAGCAATGG CTGGGCGTAC GATTTCGACG GCGATAAGAC CCTGAAGAAG
CTCGGACGAC TTCGCGTGCA CCTGGTTGCA CTCGGCGGAG CGGATGCGCG CACTTACGAA
CGCCACGGCT ACGGCGCAGC GATGAAGGCA CAGATCGATC ACGGCATTTT CGATTACTGC
GGGGCGACGG TGACGAGCTC GGCGTTGTTG CTGGAGTCCG AGTCGAGCGA TCCGGCAATG
CAGTTGCAGG CGGCCCGCGA ACTCGGACTT GGGTTGTTCC GCTGA
 
Protein sequence
MHALIVVDHD DPRSLTHALA QQIANGLSAS DPSNTFEIAD LHAEEFDPRF GVADWAVHHR 
ESAPPADVLA EQARIDRADA LVLVYPVFWW SMPALLKGWI DRVFSNGWAY DFDGDKTLKK
LGRLRVHLVA LGGADARTYE RHGYGAAMKA QIDHGIFDYC GATVTSSALL LESESSDPAM
QLQAARELGL GLFR