Gene Pfl01_3533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3533 
Symbol 
ID3713833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4010937 
End bp4012055 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content65% 
IMG OID 
Productpeptidase S58, DmpA 
Protein accessionYP_349262 
Protein GI77459755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.300582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAC GTGCCCGCGA TCTCCACATC CGCATCGGTC AATTGCAGCC TGGCCCGCTC 
AACGCCATCA CCGACGTACC CGGCGTAAGG GTCGGCCACA GCAACGTGCG CGGCCGCAGC
GCCAGCGGTC GTGACATCTG CAGCGGCGTC ACCCTGATCG AACCACGCGC CGGTTCGACC
AACGCACAAC CGTGTTTCGC CGGCGTCCAC GTCCTCAACG GCAACGGTGA CGCCACAGGG
CTGGAGTGGA TTCGCGAAGC CGGCCTGCTG ACCAGCCCGA TCGCCTTCAC CAACACTCAC
AGCCTCGGCG TGGTGCGTGA TGCCTTGATC GAGCTGGATC GCGCGCAGCA ACCGGATGAC
GGCCGTCTCT ACTGGAACAT GCCGGTGGTG CTGGAAACCT TCGATGGGTT GCTCAACGAC
ATCAACGGCT TTCATGTGAA GCCCAAACAT GTGGCCGAAG CGATGAGCAA TGCCGTTGAC
GGCCCGGTGC AGGAAGGCGC GGTGGGTGGT GGCAGCGGCA TGATCTGCCA TGAATTCAAA
GGTGGGATCG GCACCGCATC ACGCCGCTTG AGCAAGGCTC AGGGTGGCTG GACAGTGGGC
GCCATCGTCC AGGCCAACCA CGGGATTCGC AGCGAACTGC GGGTCGACGG CTACCCGGTC
GGGCGATATA TGGAACAGGT GGATTCGCCG TTCCTTCGCG CTTCGTTGCC GCATCCGGGC
ATGGGCTCGA TCGTCGTGGC CCTCGCCACC GATGCACCGC TGTTGCCGCA TCAATGCACG
CGACTGGCGC AACGGGCGAG CCTCGGTCTG GCGCGCACCG GTGGCGGCAA TGAGGATCAC
AGCGGCGACA TCTTCATCGC CTTCGCCACC GGTAACGGCC ATATCCCCCC CGCCGCCTAT
GAAGGCAAAG GCGCGTCGAC CTGCGACGGT TTGCGGATGG TCAACAACGA TCACATCAGC
GAGTTGTTCC TGGCGGCGAC CGAGGCGGTG GAAGAAGCGA TCATCAACGC CTTGCTGACC
AGCGAGAGCA CCGAAGGCAA CGGGCATTCG GTGCCGGGGC TGGATGCCGC CACCCTGCTC
GCGGCCCTGG ATAAAGCCGG GTGGCCGGGT GCTCGCTGA
 
Protein sequence
MKPRARDLHI RIGQLQPGPL NAITDVPGVR VGHSNVRGRS ASGRDICSGV TLIEPRAGST 
NAQPCFAGVH VLNGNGDATG LEWIREAGLL TSPIAFTNTH SLGVVRDALI ELDRAQQPDD
GRLYWNMPVV LETFDGLLND INGFHVKPKH VAEAMSNAVD GPVQEGAVGG GSGMICHEFK
GGIGTASRRL SKAQGGWTVG AIVQANHGIR SELRVDGYPV GRYMEQVDSP FLRASLPHPG
MGSIVVALAT DAPLLPHQCT RLAQRASLGL ARTGGGNEDH SGDIFIAFAT GNGHIPPAAY
EGKGASTCDG LRMVNNDHIS ELFLAATEAV EEAIINALLT SESTEGNGHS VPGLDAATLL
AALDKAGWPG AR