| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3532 |
|---|
| Symbol | |
|---|
| ID | 3713832 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | + |
|---|
| Start bp | 4009794 |
|---|
| End bp | 4010897 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_349261 |
|---|
| Protein GI | 77459754 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.50188 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGGTC ATCGTGGGTA TATCAACCTG GGTCTGATGG GCGTTTTGTC CGCTGCGCTG
AGTGCGCAGG CGGCCGATGC GCCGAGCGTG CATGTCTATA ACTGGTACGA CTACATCGGC
CTTAACACCC TGCATGACTT CAAGCGTGAC AGCGGTATCG AACCGGTCTA CGACACCTTC
GACAGCGCCG AAGTGCTGGA AGGCAAACTG ATGACCAGCC GCAGCGGCTA CGACGTGGTG
GTGGCGAGCA ACTTCAGCCT GCCGACCCTG ATCAAGGCCG GCGCCCTCGC CCCGCTGCCC
CGCGACCAAC TGCCGGGCTG GAAGAACCTC GACAACGATC TGCTGAGCAA GCTGGCCAAC
AACGACCCCG GCAACCAATA CGCCGTGCCT TACCTGTGGG GCACCAACGG CATCGGCTAC
AACGTCGACA AGGTGCGCGC CGTGCTGGGC GAAAAGGCCC CGGTGGATTC CTGGGATCTG
GTGTTCAAGG AAGAGAACCT GGCCAAACTC GGCGAATGCG GCGTGGCGAT GCTCGATTCG
CCGTCGGAAA TGCTCCCGGT CGCGCTGCAT TATCTCGGCC TGCCGCCCAA CAGCACCAAC
GCCGAGGACT ATCAGAAAGC CGAAGCACTG CTGCTGAAAC TGCGCCCGCA CATTGCCTAC
TTCAATTCCT CGAAATTCAT CAGCGATCTG TCCAACGGCA ACATTTGCGT GGCGGTCGGC
TGGTCCGGCG CGATGCTCGA AGCCAAGTCC ACCGCCGAGC AGGCCGGCAA CGGCGTGAAG
ATCCGGTACA GCCTGCCCAA GGAAGGCGCG CCAGTGTGGT TCGACACGCT GGTCTTGCTC
AAGGACGCAC CGCATCCGGC CCAAGGCCTG GCGTTCATCG ACTACCTGCT GCGGCCCGAT
GTGATTGCGC CGGTCAGCGA TCACTTGTCC TACCCCAACG GCAATCGAGC CGCGACGGCG
CTGGTCGCCC AGACCACCCG CGACAACCCG GCGGTGTACC CGTCAGCCAC GGCGATGGCC
ACGTTGTACA CCCTCGAGCC CTTGCCCAAA GCCACCGAAC GGGTGCGCAC GCGGGTGTGG
AGCAAGGTCA AGAACGGCCA GTAA
|
|---|
| Protein sequence | MRGHRGYINL GLMGVLSAAL SAQAADAPSV HVYNWYDYIG LNTLHDFKRD SGIEPVYDTF
DSAEVLEGKL MTSRSGYDVV VASNFSLPTL IKAGALAPLP RDQLPGWKNL DNDLLSKLAN
NDPGNQYAVP YLWGTNGIGY NVDKVRAVLG EKAPVDSWDL VFKEENLAKL GECGVAMLDS
PSEMLPVALH YLGLPPNSTN AEDYQKAEAL LLKLRPHIAY FNSSKFISDL SNGNICVAVG
WSGAMLEAKS TAEQAGNGVK IRYSLPKEGA PVWFDTLVLL KDAPHPAQGL AFIDYLLRPD
VIAPVSDHLS YPNGNRAATA LVAQTTRDNP AVYPSATAMA TLYTLEPLPK ATERVRTRVW
SKVKNGQ
|
|---|
| |