Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3530 |
Symbol | |
ID | 3713830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4007960 |
End bp | 4008901 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349259 |
Protein GI | 77459752 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.524505 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.460053 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCCTC AAGCCCTCGC CGTTCTCCAT GCCCACCTGC TCACCGCGCT GACGTCGGCA CCGGCCGAAA CCCGGCGCCT GTTCCATGGG CGCGGGCGTT GCTGGCTGGG GCTGGAGCAA GTCACCGTGG ACTGGCTGCA AGGCGTCGTA CTGGTGTCGC TGTTCAAGGA GCCCGAGGCT TCGCAGCTGG ACGACCTCAA GCGCCTGCTG CTGGAAATCA CCGGTTCGGA GCCATGGCAG CAGTCCGGCG CCCACACTTT GTTGATCCAG CACCGTTACC TGCCGCAAAG CACCGCCGAA TGGCTATTGG GTGAAGAGAT CGACGAAATG ACCATCGTCG AGGGCGGGCT GAAATATCGG GTGGATCTGG GCCGCAAGCA GAACACCGGG CTGTTCCTCG ACATGCGCTA CGGCCGCAAC TGGGTGCGCG AACAGGCGGC GGGCAAACGG GTGCTGAACC TGTTCGCCTA CACCTGCGGC TTTTCGGTGG CGGCCATCGA GGGCGGCGCC AGCCATGTGG TCAACCTCGA CATGTCCCGC GCCGCGCTGA GCCGGGGCCG CGACAATCAC CGGTTGAACG GGCATGACCT GAGCAAGGTG AGTTTCCTTG GCCATGACCT GTTCAAGTCC TGGGGCAAAG TGATCAACAG CGGCCCGTAC GATCTGGTGA TCATCGACCC GCCGTCGTTC CAGAAAGGCA GTTTTCTGCT GACCAAGGAT TATCAGCGGG TGCTGCGTCG TCTGCCGGAA TTGCTGACTG CCCAAGGCAG CGTGCTGGCG TGCATGAACG ACCCTTCGTT CGGCTCCGAC TTCCTGATCG ACGGCGTGAC CCAGGAAGCA CCGAGCCTGC GCTTCGAGCA GCGGCTGGAA AATCCGCCGG AGTTTCCGGA TATCGACCCG GAAAGCGGTC TGAAGGCGCT ACTGTTCAAG CAGATCGGCT GA
|
Protein sequence | MNPQALAVLH AHLLTALTSA PAETRRLFHG RGRCWLGLEQ VTVDWLQGVV LVSLFKEPEA SQLDDLKRLL LEITGSEPWQ QSGAHTLLIQ HRYLPQSTAE WLLGEEIDEM TIVEGGLKYR VDLGRKQNTG LFLDMRYGRN WVREQAAGKR VLNLFAYTCG FSVAAIEGGA SHVVNLDMSR AALSRGRDNH RLNGHDLSKV SFLGHDLFKS WGKVINSGPY DLVIIDPPSF QKGSFLLTKD YQRVLRRLPE LLTAQGSVLA CMNDPSFGSD FLIDGVTQEA PSLRFEQRLE NPPEFPDIDP ESGLKALLFK QIG
|
| |