Gene Pfl01_3530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3530 
Symbol 
ID3713830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4007960 
End bp4008901 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349259 
Protein GI77459752 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.524505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.460053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTC AAGCCCTCGC CGTTCTCCAT GCCCACCTGC TCACCGCGCT GACGTCGGCA 
CCGGCCGAAA CCCGGCGCCT GTTCCATGGG CGCGGGCGTT GCTGGCTGGG GCTGGAGCAA
GTCACCGTGG ACTGGCTGCA AGGCGTCGTA CTGGTGTCGC TGTTCAAGGA GCCCGAGGCT
TCGCAGCTGG ACGACCTCAA GCGCCTGCTG CTGGAAATCA CCGGTTCGGA GCCATGGCAG
CAGTCCGGCG CCCACACTTT GTTGATCCAG CACCGTTACC TGCCGCAAAG CACCGCCGAA
TGGCTATTGG GTGAAGAGAT CGACGAAATG ACCATCGTCG AGGGCGGGCT GAAATATCGG
GTGGATCTGG GCCGCAAGCA GAACACCGGG CTGTTCCTCG ACATGCGCTA CGGCCGCAAC
TGGGTGCGCG AACAGGCGGC GGGCAAACGG GTGCTGAACC TGTTCGCCTA CACCTGCGGC
TTTTCGGTGG CGGCCATCGA GGGCGGCGCC AGCCATGTGG TCAACCTCGA CATGTCCCGC
GCCGCGCTGA GCCGGGGCCG CGACAATCAC CGGTTGAACG GGCATGACCT GAGCAAGGTG
AGTTTCCTTG GCCATGACCT GTTCAAGTCC TGGGGCAAAG TGATCAACAG CGGCCCGTAC
GATCTGGTGA TCATCGACCC GCCGTCGTTC CAGAAAGGCA GTTTTCTGCT GACCAAGGAT
TATCAGCGGG TGCTGCGTCG TCTGCCGGAA TTGCTGACTG CCCAAGGCAG CGTGCTGGCG
TGCATGAACG ACCCTTCGTT CGGCTCCGAC TTCCTGATCG ACGGCGTGAC CCAGGAAGCA
CCGAGCCTGC GCTTCGAGCA GCGGCTGGAA AATCCGCCGG AGTTTCCGGA TATCGACCCG
GAAAGCGGTC TGAAGGCGCT ACTGTTCAAG CAGATCGGCT GA
 
Protein sequence
MNPQALAVLH AHLLTALTSA PAETRRLFHG RGRCWLGLEQ VTVDWLQGVV LVSLFKEPEA 
SQLDDLKRLL LEITGSEPWQ QSGAHTLLIQ HRYLPQSTAE WLLGEEIDEM TIVEGGLKYR
VDLGRKQNTG LFLDMRYGRN WVREQAAGKR VLNLFAYTCG FSVAAIEGGA SHVVNLDMSR
AALSRGRDNH RLNGHDLSKV SFLGHDLFKS WGKVINSGPY DLVIIDPPSF QKGSFLLTKD
YQRVLRRLPE LLTAQGSVLA CMNDPSFGSD FLIDGVTQEA PSLRFEQRLE NPPEFPDIDP
ESGLKALLFK QIG