Gene Pfl01_3527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3527 
Symbol 
ID3713827 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4005979 
End bp4006632 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content64% 
IMG OID 
Productisoprenylcysteine carboxyl methyltransferase 
Protein accessionYP_349256 
Protein GI77459749 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.528255 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.428685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCGC AAATGACCGT GGTCGCCGTG CTCGCCACCC TCGCCTATCT GGGCCTGGCG 
ATGTGGGGCA TCGGTGGCGT GGCGGTGTTC TTTTCTCACG GGGCGTTGGT CGTGGTGGCC
CTGGCCACGC TGGCCATGGT GGTGGCGTCG TTGTTCACGG AAGTGAACCT GAGCACCGGC
GAACGCGAGG ACCGGGCCAA TCGCTGGGTG ATTCCGGCGT TCGCGGTCAT TGGATTGGTC
AGTGCCATTC TGCCGGCTTA TTGCGACCGC ATCGGTTTCT GGACCATCGG CCGCGAGGGC
ACCCGTTGGC TGGGCGCGCT GCTGTTTATC GTCGGCGGCG GGTTGCGTTT GTGGCCGGTG
TTTGTACTGG GCCATCGATT CAGCGGGCTG GTGGCGATTC AACCGGGGCA CCGGCTGGTG
ACCGAGGGCA TTTATCGGCA TCTGCGCAAC CCCAGTTATC TGGGGCTGGT GATCAATGCG
ATAGGCTGGG CGCTGGCGTT CCGCTCGGTG GTCGGCCTGT TGCTGGCGGC GCTGACACTG
ATCCCGCTGA TCGCCCGCAT CCACTCCGAA GAGGCCTTGC TGCGCACGCA GTTCGGCGCC
GAATACGACG CTTATTGCGC CCGCAGCTGG CGATTGCTGC CCGGGGTTTA TTGA
 
Protein sequence
MSAQMTVVAV LATLAYLGLA MWGIGGVAVF FSHGALVVVA LATLAMVVAS LFTEVNLSTG 
EREDRANRWV IPAFAVIGLV SAILPAYCDR IGFWTIGREG TRWLGALLFI VGGGLRLWPV
FVLGHRFSGL VAIQPGHRLV TEGIYRHLRN PSYLGLVINA IGWALAFRSV VGLLLAALTL
IPLIARIHSE EALLRTQFGA EYDAYCARSW RLLPGVY