Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3527 |
Symbol | |
ID | 3713827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 4005979 |
End bp | 4006632 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | isoprenylcysteine carboxyl methyltransferase |
Protein accession | YP_349256 |
Protein GI | 77459749 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.528255 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.428685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCGC AAATGACCGT GGTCGCCGTG CTCGCCACCC TCGCCTATCT GGGCCTGGCG ATGTGGGGCA TCGGTGGCGT GGCGGTGTTC TTTTCTCACG GGGCGTTGGT CGTGGTGGCC CTGGCCACGC TGGCCATGGT GGTGGCGTCG TTGTTCACGG AAGTGAACCT GAGCACCGGC GAACGCGAGG ACCGGGCCAA TCGCTGGGTG ATTCCGGCGT TCGCGGTCAT TGGATTGGTC AGTGCCATTC TGCCGGCTTA TTGCGACCGC ATCGGTTTCT GGACCATCGG CCGCGAGGGC ACCCGTTGGC TGGGCGCGCT GCTGTTTATC GTCGGCGGCG GGTTGCGTTT GTGGCCGGTG TTTGTACTGG GCCATCGATT CAGCGGGCTG GTGGCGATTC AACCGGGGCA CCGGCTGGTG ACCGAGGGCA TTTATCGGCA TCTGCGCAAC CCCAGTTATC TGGGGCTGGT GATCAATGCG ATAGGCTGGG CGCTGGCGTT CCGCTCGGTG GTCGGCCTGT TGCTGGCGGC GCTGACACTG ATCCCGCTGA TCGCCCGCAT CCACTCCGAA GAGGCCTTGC TGCGCACGCA GTTCGGCGCC GAATACGACG CTTATTGCGC CCGCAGCTGG CGATTGCTGC CCGGGGTTTA TTGA
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Protein sequence | MSAQMTVVAV LATLAYLGLA MWGIGGVAVF FSHGALVVVA LATLAMVVAS LFTEVNLSTG EREDRANRWV IPAFAVIGLV SAILPAYCDR IGFWTIGREG TRWLGALLFI VGGGLRLWPV FVLGHRFSGL VAIQPGHRLV TEGIYRHLRN PSYLGLVINA IGWALAFRSV VGLLLAALTL IPLIARIHSE EALLRTQFGA EYDAYCARSW RLLPGVY
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