Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3522 |
Symbol | |
ID | 3713745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 4001240 |
End bp | 4002037 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_349251 |
Protein GI | 77459744 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.284678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.417137 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCG ATCTGAGCGG AAAACTGGCG ATTGTCAGCG GCAGCACGGC GGGCATCGGT TTGGGCATCA GCCAGTCGCT GGCCGAGGCG GGCGCCACGG TGGTGGTGAT CGGTCGCGAC GCGGCCAAGG TCGAACAGGC GCTTACAAGC ATTCGAGACA AGGTGCCGGG CGCGCAACTG CGCGGTCTGA CGGCGGATCT GGGCACGGCC GAAGGCGCGC AGAAACTGTT CGCCGCCGAA CCGAAAGCCG ACATCCTGGT GAACAACCTC GGCATCTACA ACGCCGTGGA TTTCTTCGAC GCGCCGGACG ATGAGTGGAC GCGCTTCTAT GAGATCAACG TGATCTCCGG CGTGCGCTTG TCGCGGCATT ACGTGCCGGC GATGGTCGAG CAGGGCTGGG GCCGGGTGAT CTTCCTGTCT TCGGAATCCG GCGTAGCCAC CCCGGCCGAC ATGATCAACT ACGGCGTGAC CAAAAGCGCC AACCTCGCGG TGTCCCATGG CCTGGCCAAA CGCCTGGCGG GCACCGGGGT TACGGTCAAC GCGATCCTGC CGGGGCCGAC CTTCACCGAC GGTGTCGAGG AAATGCTCAA GGATGCCGCC GCCGAGTCTG GCCGCAGCCT GCGGGACGAG GCTGACGCGT TTGTCCGCCG GGCCCGCCCG AGCTCGATCA TCCAGCGCGT GGCGGATGTC GAAGAGGTCG CGCACCTGGT CACCTACATC GCTTCACCGC TGTCTTCAGC TACCACTGGC GCCGCGTTGC GGGTCGACGG TGGCGTGGTC GACAGCCTGA CTATCTGA
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Protein sequence | MKIDLSGKLA IVSGSTAGIG LGISQSLAEA GATVVVIGRD AAKVEQALTS IRDKVPGAQL RGLTADLGTA EGAQKLFAAE PKADILVNNL GIYNAVDFFD APDDEWTRFY EINVISGVRL SRHYVPAMVE QGWGRVIFLS SESGVATPAD MINYGVTKSA NLAVSHGLAK RLAGTGVTVN AILPGPTFTD GVEEMLKDAA AESGRSLRDE ADAFVRRARP SSIIQRVADV EEVAHLVTYI ASPLSSATTG AALRVDGGVV DSLTI
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