Gene Pfl01_3522 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3522 
Symbol 
ID3713745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp4001240 
End bp4002037 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content65% 
IMG OID 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_349251 
Protein GI77459744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.284678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.417137 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCG ATCTGAGCGG AAAACTGGCG ATTGTCAGCG GCAGCACGGC GGGCATCGGT 
TTGGGCATCA GCCAGTCGCT GGCCGAGGCG GGCGCCACGG TGGTGGTGAT CGGTCGCGAC
GCGGCCAAGG TCGAACAGGC GCTTACAAGC ATTCGAGACA AGGTGCCGGG CGCGCAACTG
CGCGGTCTGA CGGCGGATCT GGGCACGGCC GAAGGCGCGC AGAAACTGTT CGCCGCCGAA
CCGAAAGCCG ACATCCTGGT GAACAACCTC GGCATCTACA ACGCCGTGGA TTTCTTCGAC
GCGCCGGACG ATGAGTGGAC GCGCTTCTAT GAGATCAACG TGATCTCCGG CGTGCGCTTG
TCGCGGCATT ACGTGCCGGC GATGGTCGAG CAGGGCTGGG GCCGGGTGAT CTTCCTGTCT
TCGGAATCCG GCGTAGCCAC CCCGGCCGAC ATGATCAACT ACGGCGTGAC CAAAAGCGCC
AACCTCGCGG TGTCCCATGG CCTGGCCAAA CGCCTGGCGG GCACCGGGGT TACGGTCAAC
GCGATCCTGC CGGGGCCGAC CTTCACCGAC GGTGTCGAGG AAATGCTCAA GGATGCCGCC
GCCGAGTCTG GCCGCAGCCT GCGGGACGAG GCTGACGCGT TTGTCCGCCG GGCCCGCCCG
AGCTCGATCA TCCAGCGCGT GGCGGATGTC GAAGAGGTCG CGCACCTGGT CACCTACATC
GCTTCACCGC TGTCTTCAGC TACCACTGGC GCCGCGTTGC GGGTCGACGG TGGCGTGGTC
GACAGCCTGA CTATCTGA
 
Protein sequence
MKIDLSGKLA IVSGSTAGIG LGISQSLAEA GATVVVIGRD AAKVEQALTS IRDKVPGAQL 
RGLTADLGTA EGAQKLFAAE PKADILVNNL GIYNAVDFFD APDDEWTRFY EINVISGVRL
SRHYVPAMVE QGWGRVIFLS SESGVATPAD MINYGVTKSA NLAVSHGLAK RLAGTGVTVN
AILPGPTFTD GVEEMLKDAA AESGRSLRDE ADAFVRRARP SSIIQRVADV EEVAHLVTYI
ASPLSSATTG AALRVDGGVV DSLTI