| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pfl01_3517 |
|---|
| Symbol | |
|---|
| ID | 3713740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas fluorescens Pf0-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007492 |
|---|
| Strand | - |
|---|
| Start bp | 3997074 |
|---|
| End bp | 3998012 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_349246 |
|---|
| Protein GI | 77459739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.28634 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.638371 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGAT CCTCTGATGG GTTTTATCCT GCCTACGAAG GAGAGTCGAG CAACGTCTCG
GGGGTGTCCT GGGGCGCGAT CTTCGCAGGG GCTGCCGCTG CGGCGGCACT GTCGCTGATT
CTCGTGCTGC TGGGCTTCGG TCTGGGCTTC TCCGCCGTAT CACCGTGGGC CGGGGAGGGT
ATCAGCGCCA AGGGGCTGGG CATTTCCACC ATCATCTGGC TGGCGGCCAC GCAAATCATC
GCTTCGGGGC TCGGTGGCTA CATCGCTGGT CGCTTGCGAG TGAAGTGGGC CAACATGCAC
GGTGACGAGG TTTATTTCCG CGACACCGCC CATGGCTTCC TGTCCTGGTG TGTAGCGACT
CTGGTCACCG CAACGCTGGT GGTCGGCTCG GTCAGCAGCA TCGTCAGCGG TGGCGTGCAG
GCCGGTGCAA GTGTCGCCGG TGGCGCAGCC AGTGCGATGA CTCAGGCGGC GGGTACTGCC
GCGGCCAACA CCGACAGTGA TCAGTACGGC TACTTCGTCG ACAGCCTGTT TCGCGACGAT
CGTCCCGCCG CCGTCAGCGA TGACGCCGCC CGTGGCACCG TGACCCGGAT CTTCGCCCAG
AGCCTGGCCA ACGGTCAGCT CAGCGCCGAA GACCGTACCT ACCTCGCACA ACTGGTCGCT
CAGCGTACCA ACCTGACCCA GGCCGACGCC GAACGTCGGG TCGATGAAAT CTACGCCCGC
ACCCAGAAGG CAATCGCCGA CGCCAAAGTG AAAGCGCAAC AAGCCGCCGA CACCGCCGCC
AAAGTCGCTG CCTGGACCAC GCTGTGGATG TTCATCGCAT TGTTGGCCGG TGCGTTCTTC
GCCAGCCTCT CGGCCACCTT CGGCGGTCGC CGCCGGGATG CGGTCGAGTA CGTCGAAGTC
GAAACCTACA CCACGACCAC GCTGCCGCCA GTCCGTTAA
|
|---|
| Protein sequence | MNRSSDGFYP AYEGESSNVS GVSWGAIFAG AAAAAALSLI LVLLGFGLGF SAVSPWAGEG
ISAKGLGIST IIWLAATQII ASGLGGYIAG RLRVKWANMH GDEVYFRDTA HGFLSWCVAT
LVTATLVVGS VSSIVSGGVQ AGASVAGGAA SAMTQAAGTA AANTDSDQYG YFVDSLFRDD
RPAAVSDDAA RGTVTRIFAQ SLANGQLSAE DRTYLAQLVA QRTNLTQADA ERRVDEIYAR
TQKAIADAKV KAQQAADTAA KVAAWTTLWM FIALLAGAFF ASLSATFGGR RRDAVEYVEV
ETYTTTTLPP VR
|
|---|
| |