Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3514 |
Symbol | |
ID | 3713737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | - |
Start bp | 3993694 |
End bp | 3994953 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | FAD dependent oxidoreductase |
Protein accession | YP_349243 |
Protein GI | 77459736 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.137187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.699737 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAAGT TCTATGACGT GGTCATCGCC GGCGGCGGTG TGATCGGCGC CTCCATCGCC TATCAGTTGT CCAAACGCAA AGGCCTCAAG GTTGCGCTGA TCGACGCCAA GCGTCCGGGC AACGCGACCC GCGCTTCGGC CGGCGGTTTG TGGGCGATTG GCGAGTCAGT GGGGCTGGGC TGCGGGGTGA TTTTCTTCCG CATGATGTCG GCCAGCCGCA AGCGCGAAAC CCAGGGCGCG GCGGTGGCGG TGGACGCCAG CACGCCGCAC ATTCTGCCGC CGTCGTTTTT CGATTTCGCC TTGCAGTCCA ACGCGCTGTA CCCGGCGCTG CACCGCGAAC TGCGCGACAA CCACGGGATG GATTTCAAGT TCGAAAAGAC CGGGCTCAAG TTCGTGATCT ATGACGATGA AGACCGGTTG TACGCCGAGC ACATCGTCGG TTGCATTCCG CACTTGGCCG ATCAGGTGCG CTGGCTGGAT CAGGCGGCGT TGCGCGAGTC CGAGCCGAGC GTCAGCCATG AGGCACGCGG GGCGCTGGAG TTTCTCTGCG ACCACCAGGT CAGCCCGTTC CGCCTGGCCG ACGCCTACAC CGAAGGCGCC CGGCAGAATG GCGTGGACAT GTACGTCAAC ACCAACATCA CCGGCGTGTT GCATCACGGC ACCCGGGTGA CTGGCGTACA GACGGCCGAA GCCGGGGTGT TCCACTGCAA AACCCTGATC AACGCCGCCG GCGCCTGGGC AGCGGACTTG AGCGAGTGGG CCACGGGCAT CCGCATTCCG GTGAAACCGG TGAAAGGCCA GATCCTGCTG ACCGAACGTC TGCCGAAAAT ACTCAACGGT TGCCTGACCA CCAGCGATTG CTACATGGCG CAGAAGGATA ACGGCGAAAT CCTGATCGGC AGCACCACCG AGGACAAGGG CTTCGACGTC ACCACCACCT GGCCGGAAAT CGCCGGGCTG GTGCAGGGCG CGGTGCGTTG TTTGCCGGAA CTGGCGGACA TCAACCTCAA ACGCACCTGG GCCGGATTGC GGCCGGGTTC GCCGGACGAA TTGCCGATTC TCGGGCCGAT GGCCGGGGTG GAGGGGTATC TCAACGCCTG CGGGCATTTC CGCACCGGGG TGCTGACGTC GGCGATCACC GGGGTGTTGC TGGACAAGCT GGTCAACGAT GAACCGCTGT CGCTGGACAT CACGCCGTTT CTGGCGGACC GGTTTGCAGA GGCGCCCCTG AAGGAGGAGC GGGCGCTGGA GATGGCCTGA
|
Protein sequence | MSKFYDVVIA GGGVIGASIA YQLSKRKGLK VALIDAKRPG NATRASAGGL WAIGESVGLG CGVIFFRMMS ASRKRETQGA AVAVDASTPH ILPPSFFDFA LQSNALYPAL HRELRDNHGM DFKFEKTGLK FVIYDDEDRL YAEHIVGCIP HLADQVRWLD QAALRESEPS VSHEARGALE FLCDHQVSPF RLADAYTEGA RQNGVDMYVN TNITGVLHHG TRVTGVQTAE AGVFHCKTLI NAAGAWAADL SEWATGIRIP VKPVKGQILL TERLPKILNG CLTTSDCYMA QKDNGEILIG STTEDKGFDV TTTWPEIAGL VQGAVRCLPE LADINLKRTW AGLRPGSPDE LPILGPMAGV EGYLNACGHF RTGVLTSAIT GVLLDKLVND EPLSLDITPF LADRFAEAPL KEERALEMA
|
| |