Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3511 |
Symbol | |
ID | 3713734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3990002 |
End bp | 3990772 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | |
Product | extracellular solute-binding protein |
Protein accession | YP_349240 |
Protein GI | 77459733 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0442496 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.383043 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAC TGTTTACCGT TACCGCCCTG CTCGCCGGCC TCGCATTCAA CGTTGCGGCC CAGGCCGAAG AACTGCGGGT CATGACTTCC GGCGGTTTCA CCGCCGCCTA CAAGATCCTC GGGCCGAAAT TCGCCGCCGC CACCGGCAAC ACGCTGGACA CCCAACTCGG CCCGTCGATG GGCAAGGCGC CGGAGGCAAT CCCCAATCGC CTCGCCCGTG GTGAAAAGGC CGACGTGGTG ATCATGGTCG GCTACGCCCT CGATGATCTG ATCAAGCAAG GCAAGGTTGA TCCGGCTTCG CGGGTGGAAC TGGCGGATTC GCGAATCGGC CTGGTGGTGC GCGAAGGCGC GCCGAAACCG GACATCAGCA ACGTCGACGC TCTGAAGAAA ACCCTGCTCG ATGCAAAATC GGTGGCCTAC TCCGACAGCG CCAGCGGCGT GTACATCGAG CAGCAATTGT TCAAGAAACT GGGGATCGAA GATCAGCTGA AACCGAAGGC GAAGATGATC CCGAAAATCC CGGTGGGTTC GGTGGTCGCA AACGGCGACT ATCAACTGGG CTTCCAGCAG GTCAGCGAAT TGCTGCCGGT GCCGGGGGTG AGTTTTGTGG CGAAGATTCC GGAATCGGTG CAGTCGGTAA CGCGGTTTGC AGCGGGGATT CCGGTGGGTG CGCAGCATCC GCAGGAAGCC AAAGCGTTGC TCGCTTATCT GGCCGCACCT GCAGCCCAGC CTGACGTACA GGCCACCGGG CTGGATTCGG TCAAGCGCTG A
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Protein sequence | MKKLFTVTAL LAGLAFNVAA QAEELRVMTS GGFTAAYKIL GPKFAAATGN TLDTQLGPSM GKAPEAIPNR LARGEKADVV IMVGYALDDL IKQGKVDPAS RVELADSRIG LVVREGAPKP DISNVDALKK TLLDAKSVAY SDSASGVYIE QQLFKKLGIE DQLKPKAKMI PKIPVGSVVA NGDYQLGFQQ VSELLPVPGV SFVAKIPESV QSVTRFAAGI PVGAQHPQEA KALLAYLAAP AAQPDVQATG LDSVKR
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