Gene Pfl01_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3510 
Symbol 
ID3713733 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3988699 
End bp3989991 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content61% 
IMG OID 
Productcitrate-proton symport 
Protein accessionYP_349239 
Protein GI77459732 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0855554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.43061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCT CAATCCCACA CGGCGGCTCG CGGGCCGGCG CCATTTTCCG GGTGACCTCG 
GGTAACTTCC TCGAACAGTT CGACTTCTTT CTGTTCGGCT TCTACGCCAC GCAGATCGCG
GCGGTGTTCT TTCCGGCGAG CAGTGAGTTC GCGTCCCTGA TGATGACTTT CGCAGTGTTC
GGCGCAGGCT TTTTGATGCG TCCGCTGGGG GCTATCGTGC TCGGCGCGTA CATTGATGAC
GTCGGTCGGC GCAAAGGGTT GATTGTCACC CTGTCGATCA TGGCCAGCGG CACGATCTTG
ATTGTGCTGG TGCCCGGATA CGAAACCATT GGCCTGTTCG CCCCGGCGCT GGTGTTGATC
GGAAGGCTGT TGCAAGGTTT CTCCGCGGGT GCGGAATTGG GCGGGGTTTC GGTGTATCTC
TCGGAGATCG CTACACCCGG TCGCAAAGGC TTTTTCACCG CCTGGCAGTC GGCCAGTCAG
CAGGTGGCCA TCGTCGTCGC CGCCGCGCTC GGTTACGGTT TGAACCAGTG GATGGCGCCG
GAAGCGGTCG CCGATTGGGG CTGGCGGATT CCGTTTTTCG TCGGCTGCAT GATCGTTCCT
TTCATCTTCT TTCTGCGGCG CAATCTGGCG GAAACCGAAG AGTTCGCCGC TCGCAAACAT
CGTCCAAGCA TGAAGGAAGT GTTCCGCACC CTCGGTCAGA ACTTGGGCGT GGTGCTGGGC
GGGATGCTGA TGGTTGCCCT GACTACCACT GCGTTCTACC TGATCACCGT GTACGCACCG
ACCTTCGGCA AAACCGTGCT GCACCTGAGC ACATCCGATG CGTTGCTGGT GACGTTGCTG
GTGGGCGTTT CCAACTTCTT CTGGCTGCCG ATTGGCGGTG CATTGTCCGA TCGCGTCGGC
CGCCGTCCAG TGCTGATCGC CATGGCGCTG CTGGCTCTGG CCACCACGTA TCCAGCGCTG
TCGTACCTGG TGCAGGCGCC GAGCTTCAGT CACATGCTGC TGTCGCTGTT GTGGCTGTCG
TTTATCTACG GCCTGTACAA CGGCGCGATG ATTCCCGCGC TGACCGAGAT CATGCCGGTG
GAAGTGCGGG TGGCCGGTTT CTCCCTGGCC TATAGCCTCG CCACTGCCGT GTTCGGCGGA
TTCACTCCAG CGATGTCGAC CTTCCTGATC CAGTACACCG GCGACAAAGC CGCACCAGGT
TACTGGATGA GCATCGGCGC GCTCTGCGCA TTGGGCGCGA CGCTTTATCT GTATCGCCGG
GCCGGCGGTC GTCTGCAACC TGTTACTGCC TGA
 
Protein sequence
MTASIPHGGS RAGAIFRVTS GNFLEQFDFF LFGFYATQIA AVFFPASSEF ASLMMTFAVF 
GAGFLMRPLG AIVLGAYIDD VGRRKGLIVT LSIMASGTIL IVLVPGYETI GLFAPALVLI
GRLLQGFSAG AELGGVSVYL SEIATPGRKG FFTAWQSASQ QVAIVVAAAL GYGLNQWMAP
EAVADWGWRI PFFVGCMIVP FIFFLRRNLA ETEEFAARKH RPSMKEVFRT LGQNLGVVLG
GMLMVALTTT AFYLITVYAP TFGKTVLHLS TSDALLVTLL VGVSNFFWLP IGGALSDRVG
RRPVLIAMAL LALATTYPAL SYLVQAPSFS HMLLSLLWLS FIYGLYNGAM IPALTEIMPV
EVRVAGFSLA YSLATAVFGG FTPAMSTFLI QYTGDKAAPG YWMSIGALCA LGATLYLYRR
AGGRLQPVTA