Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3496 |
Symbol | |
ID | 3713719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3975806 |
End bp | 3978178 |
Gene Length | 2373 bp |
Protein Length | 790 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_349225 |
Protein GI | 77459718 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0811299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0812122 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTATGA CTGATCAAAC TCTAGCCCAG CTCTTCGCTT CAATCGCTTT CAAAGTAGAC CAAACAGGAA TCAAACAAGC ACAGCAACTT CTAAGGGCTA TAGAGAAGCA AGCACAGGCA ACAGGCAGAG CGATTGACAA AGCACTTAAA GGCTCTGGTG GTCGGAATGC CAATAATCTT GTAGCAGCAC AGAAAGCAGC AACACAACAA CAGTTCGCAC AACAACTACA GAACGCAAAG CTCACTAAGA TTCAGGGTCA AGCAGCCGCC TCTAATGCTG CATATGGACT CAAGACACAA CAACAGCAAG TGGCCTTAGC AATCAAACAA CAAAAGTTGG CAGCAGCTAC ACAGGCAACA CAAGCCGCCG CTGCTAAGCA AAGTCTTCAG CAACAAGCTC AAATCCTCGC CAACCAGATC AAGCAACACA GCTTGACTAA CCGTAATGCT GCTGCTGCCC AACAACACCA ACTACGTCAA CTGAGAATCC AAGCTGCACA ACACAGAGCA GCCCGTCAGG CTTCTGGCCT TGCTGGTGGT AGTGGTCGTA GCTTCCATGG GTACGGTGGA CATGGTGGGG GTGGGTTGCT TGGCGTTGGT CATAGCTCGC TACACGGCTT TGGCGGTATC GGTCGTTTTG CTGGTGGTGT CACAGGTAGT GCTGAAGGTG CTCTAGGGGG CTTGGAAGGG CTTGCAGGCG GTTTGGGTCG TGCCTCTATG GGGTTGGGTG CTGTCGCTGG TAGTGCTGCC CTTGTGGTGG CTGCGTTCGC TGCTATCAAC GCCGCTGCTG TGGGTTATGC CCGTGAAGCT GAACGAGCTT CCAACACACG TAACCAACGG ATGGGACAGT TTGAGTCTGT AGGCGACCGT ACAGCGGCAA ACGCCGAACG CATGAACAAC CGCTATGAGA ACTTCGCACA GAAGGAAGGC TTGAACGCTG CACAGCTTGG CCCTGACTAC GCCAAGATTG TTGGTGCTCT CTCTCCCAAG ATCGGAGTAG ACAAAGCCGC CGATACCACA GAGGGAATCA TGAGGTACGG CAAGGCTCAA CACCTGTCGA ATGAAAACAT GTCCAAGATC AGTCTGGGTA TGCGTCAGGC TCTCGGTAAA GGTCAGTTGT TCTCTGAGGA ATGGACAGGC CAGATTGCTG AGCACCTTGG AGCACACGCT AACGAGTTTG GTGCTCAAGC TTGGCAACGT GCTACAGGCG GTAAACTGAC AGGAGACGCA GCCCAGAAAG CATTCGGTAA AGATCGCCAA GACAGAAAGA TCAGTGGTGA CGCGCTTACC AAGTTCATGG TTGAACTAGG CCAAGTGCTT AACCAACATG CTAACGATGG TGGGTTGCTG GATAAGGCAC GTAATACCCA AGACTCTTGG GATAACCGTA TCGCTAACCA GTATCAGGCC AACATGGTTA AGGCTTACGA CAATACTGGC CTACACGACA CAATGACAGG TAGTGGTGGT TTGTATGACA GCTTCTTGAA GTTTATGAAT GAGCTTCAGC CTGAGTTTGT CGCTATCGGC AGTGCCTCTA ACTCTGTCCT GCAAGGTTTG ACAGGTATCA CCAAATGGCT GACAGGTGTT GCAGCATGGT TCAACAACGG TGAAAGCTAC TTTGATCCTA AGTTCACTAG GGATATGGGG AATGCTTTTG CAGAGCTTGG ACAGTCGCTA ACAACGCTAT GGAACACGGT AGCTCAAATC CTCGGACTCT CTGAGCAAGC TGGAGTATTC AAGACCTCTG GTGAAGTGGT GATTGGCGTA CTTACAAGTA TGGTGGATGT GTTCACTATC CTTGCTGATG CAGTAATCGG CACAATCCGT CTAATCCAAG ATGCACTACA TGCACTGCCA GATAGCCTAG GCGGCATCAG TGATGATAGT TACGCCAAGA TTGTTGCACA GCGTCAAGTT GATGATAAGA AGCGAGCCGA CATTGCAGCA GCAAGAGAGC TAGACCGTCA TGGCGGTGGC CCAATGCCTA ACCCTAACGG TAACGTTGAT CCTAACGCAC CTTGGAGAGT TACAGACGGT AGCGACATTC CTACTGTACC CAACACTCCC AAAGACTGGC GTGTGACTGA TGGAAGCGAT ATCCCAGTTA TTGATAGTAA GGCTGTAGCT GCGATGTCTC AAGCTCCAAT CACTAATCCT GTTCAACCCG CACTCAACGG TAAAGACTTG GCTCCAACAA CAGTGAACAA CAACATCATT GTTAACCAAG CTCCAATCAA TATCAGTGGT GTTGAGACTG ACAAGGTTAG CGGGATGCTT GAAAAGCACA GAGAAGAAAG CAAGAAAGAG CTTCAGCAAG TCGTTGACAA GCTGTCCCCA CCATCTAACG GGTATAGAGC AAGAGGTAAC TAA
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Protein sequence | MSMTDQTLAQ LFASIAFKVD QTGIKQAQQL LRAIEKQAQA TGRAIDKALK GSGGRNANNL VAAQKAATQQ QFAQQLQNAK LTKIQGQAAA SNAAYGLKTQ QQQVALAIKQ QKLAAATQAT QAAAAKQSLQ QQAQILANQI KQHSLTNRNA AAAQQHQLRQ LRIQAAQHRA ARQASGLAGG SGRSFHGYGG HGGGGLLGVG HSSLHGFGGI GRFAGGVTGS AEGALGGLEG LAGGLGRASM GLGAVAGSAA LVVAAFAAIN AAAVGYAREA ERASNTRNQR MGQFESVGDR TAANAERMNN RYENFAQKEG LNAAQLGPDY AKIVGALSPK IGVDKAADTT EGIMRYGKAQ HLSNENMSKI SLGMRQALGK GQLFSEEWTG QIAEHLGAHA NEFGAQAWQR ATGGKLTGDA AQKAFGKDRQ DRKISGDALT KFMVELGQVL NQHANDGGLL DKARNTQDSW DNRIANQYQA NMVKAYDNTG LHDTMTGSGG LYDSFLKFMN ELQPEFVAIG SASNSVLQGL TGITKWLTGV AAWFNNGESY FDPKFTRDMG NAFAELGQSL TTLWNTVAQI LGLSEQAGVF KTSGEVVIGV LTSMVDVFTI LADAVIGTIR LIQDALHALP DSLGGISDDS YAKIVAQRQV DDKKRADIAA ARELDRHGGG PMPNPNGNVD PNAPWRVTDG SDIPTVPNTP KDWRVTDGSD IPVIDSKAVA AMSQAPITNP VQPALNGKDL APTTVNNNII VNQAPINISG VETDKVSGML EKHREESKKE LQQVVDKLSP PSNGYRARGN
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