Gene Pfl01_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3496 
Symbol 
ID3713719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3975806 
End bp3978178 
Gene Length2373 bp 
Protein Length790 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_349225 
Protein GI77459718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0811299 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0812122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTATGA CTGATCAAAC TCTAGCCCAG CTCTTCGCTT CAATCGCTTT CAAAGTAGAC 
CAAACAGGAA TCAAACAAGC ACAGCAACTT CTAAGGGCTA TAGAGAAGCA AGCACAGGCA
ACAGGCAGAG CGATTGACAA AGCACTTAAA GGCTCTGGTG GTCGGAATGC CAATAATCTT
GTAGCAGCAC AGAAAGCAGC AACACAACAA CAGTTCGCAC AACAACTACA GAACGCAAAG
CTCACTAAGA TTCAGGGTCA AGCAGCCGCC TCTAATGCTG CATATGGACT CAAGACACAA
CAACAGCAAG TGGCCTTAGC AATCAAACAA CAAAAGTTGG CAGCAGCTAC ACAGGCAACA
CAAGCCGCCG CTGCTAAGCA AAGTCTTCAG CAACAAGCTC AAATCCTCGC CAACCAGATC
AAGCAACACA GCTTGACTAA CCGTAATGCT GCTGCTGCCC AACAACACCA ACTACGTCAA
CTGAGAATCC AAGCTGCACA ACACAGAGCA GCCCGTCAGG CTTCTGGCCT TGCTGGTGGT
AGTGGTCGTA GCTTCCATGG GTACGGTGGA CATGGTGGGG GTGGGTTGCT TGGCGTTGGT
CATAGCTCGC TACACGGCTT TGGCGGTATC GGTCGTTTTG CTGGTGGTGT CACAGGTAGT
GCTGAAGGTG CTCTAGGGGG CTTGGAAGGG CTTGCAGGCG GTTTGGGTCG TGCCTCTATG
GGGTTGGGTG CTGTCGCTGG TAGTGCTGCC CTTGTGGTGG CTGCGTTCGC TGCTATCAAC
GCCGCTGCTG TGGGTTATGC CCGTGAAGCT GAACGAGCTT CCAACACACG TAACCAACGG
ATGGGACAGT TTGAGTCTGT AGGCGACCGT ACAGCGGCAA ACGCCGAACG CATGAACAAC
CGCTATGAGA ACTTCGCACA GAAGGAAGGC TTGAACGCTG CACAGCTTGG CCCTGACTAC
GCCAAGATTG TTGGTGCTCT CTCTCCCAAG ATCGGAGTAG ACAAAGCCGC CGATACCACA
GAGGGAATCA TGAGGTACGG CAAGGCTCAA CACCTGTCGA ATGAAAACAT GTCCAAGATC
AGTCTGGGTA TGCGTCAGGC TCTCGGTAAA GGTCAGTTGT TCTCTGAGGA ATGGACAGGC
CAGATTGCTG AGCACCTTGG AGCACACGCT AACGAGTTTG GTGCTCAAGC TTGGCAACGT
GCTACAGGCG GTAAACTGAC AGGAGACGCA GCCCAGAAAG CATTCGGTAA AGATCGCCAA
GACAGAAAGA TCAGTGGTGA CGCGCTTACC AAGTTCATGG TTGAACTAGG CCAAGTGCTT
AACCAACATG CTAACGATGG TGGGTTGCTG GATAAGGCAC GTAATACCCA AGACTCTTGG
GATAACCGTA TCGCTAACCA GTATCAGGCC AACATGGTTA AGGCTTACGA CAATACTGGC
CTACACGACA CAATGACAGG TAGTGGTGGT TTGTATGACA GCTTCTTGAA GTTTATGAAT
GAGCTTCAGC CTGAGTTTGT CGCTATCGGC AGTGCCTCTA ACTCTGTCCT GCAAGGTTTG
ACAGGTATCA CCAAATGGCT GACAGGTGTT GCAGCATGGT TCAACAACGG TGAAAGCTAC
TTTGATCCTA AGTTCACTAG GGATATGGGG AATGCTTTTG CAGAGCTTGG ACAGTCGCTA
ACAACGCTAT GGAACACGGT AGCTCAAATC CTCGGACTCT CTGAGCAAGC TGGAGTATTC
AAGACCTCTG GTGAAGTGGT GATTGGCGTA CTTACAAGTA TGGTGGATGT GTTCACTATC
CTTGCTGATG CAGTAATCGG CACAATCCGT CTAATCCAAG ATGCACTACA TGCACTGCCA
GATAGCCTAG GCGGCATCAG TGATGATAGT TACGCCAAGA TTGTTGCACA GCGTCAAGTT
GATGATAAGA AGCGAGCCGA CATTGCAGCA GCAAGAGAGC TAGACCGTCA TGGCGGTGGC
CCAATGCCTA ACCCTAACGG TAACGTTGAT CCTAACGCAC CTTGGAGAGT TACAGACGGT
AGCGACATTC CTACTGTACC CAACACTCCC AAAGACTGGC GTGTGACTGA TGGAAGCGAT
ATCCCAGTTA TTGATAGTAA GGCTGTAGCT GCGATGTCTC AAGCTCCAAT CACTAATCCT
GTTCAACCCG CACTCAACGG TAAAGACTTG GCTCCAACAA CAGTGAACAA CAACATCATT
GTTAACCAAG CTCCAATCAA TATCAGTGGT GTTGAGACTG ACAAGGTTAG CGGGATGCTT
GAAAAGCACA GAGAAGAAAG CAAGAAAGAG CTTCAGCAAG TCGTTGACAA GCTGTCCCCA
CCATCTAACG GGTATAGAGC AAGAGGTAAC TAA
 
Protein sequence
MSMTDQTLAQ LFASIAFKVD QTGIKQAQQL LRAIEKQAQA TGRAIDKALK GSGGRNANNL 
VAAQKAATQQ QFAQQLQNAK LTKIQGQAAA SNAAYGLKTQ QQQVALAIKQ QKLAAATQAT
QAAAAKQSLQ QQAQILANQI KQHSLTNRNA AAAQQHQLRQ LRIQAAQHRA ARQASGLAGG
SGRSFHGYGG HGGGGLLGVG HSSLHGFGGI GRFAGGVTGS AEGALGGLEG LAGGLGRASM
GLGAVAGSAA LVVAAFAAIN AAAVGYAREA ERASNTRNQR MGQFESVGDR TAANAERMNN
RYENFAQKEG LNAAQLGPDY AKIVGALSPK IGVDKAADTT EGIMRYGKAQ HLSNENMSKI
SLGMRQALGK GQLFSEEWTG QIAEHLGAHA NEFGAQAWQR ATGGKLTGDA AQKAFGKDRQ
DRKISGDALT KFMVELGQVL NQHANDGGLL DKARNTQDSW DNRIANQYQA NMVKAYDNTG
LHDTMTGSGG LYDSFLKFMN ELQPEFVAIG SASNSVLQGL TGITKWLTGV AAWFNNGESY
FDPKFTRDMG NAFAELGQSL TTLWNTVAQI LGLSEQAGVF KTSGEVVIGV LTSMVDVFTI
LADAVIGTIR LIQDALHALP DSLGGISDDS YAKIVAQRQV DDKKRADIAA ARELDRHGGG
PMPNPNGNVD PNAPWRVTDG SDIPTVPNTP KDWRVTDGSD IPVIDSKAVA AMSQAPITNP
VQPALNGKDL APTTVNNNII VNQAPINISG VETDKVSGML EKHREESKKE LQQVVDKLSP
PSNGYRARGN